Package: compEpiTools
Type: Package
Title: Tools for computational epigenomics
Version: 1.47.0
Date: 2025-07-22
Authors@R: c(person("Mattia", "Pelizzola", role = "aut"), person("Kamal", "Kishore", role = "aut"), person("Mattia", "Furlan", email = "mattia.furlan@iit.it", role = c("ctb","cre")))
Description: Tools for computational epigenomics developed for the
        analysis, integration and simultaneous visualization of various
        (epi)genomics data types across multiple genomic regions in
        multiple samples.
License: GPL
Imports: AnnotationDbi, BiocGenerics, Biostrings, Rsamtools, parallel,
        grDevices, gplots, IRanges, GenomicFeatures, XVector,
        methylPipe, GO.db, S4Vectors, Seqinfo
Depends: R (>= 3.5.0), methods, topGO, GenomicRanges
Suggests: BSgenome.Mmusculus.UCSC.mm9,
        TxDb.Mmusculus.UCSC.mm9.knownGene, org.Mm.eg.db, knitr,
        rtracklayer
VignetteBuilder: knitr
biocViews: GeneExpression, Sequencing, Visualization, GenomeAnnotation,
        Coverage
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev libjpeg-dev
        liblzma-dev libpng-dev libuv1-dev libxml2-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:39:35 UTC
RemoteUrl: https://github.com/bioc/compEpiTools
RemoteRef: HEAD
RemoteSha: 2517e02b6b11efe74a741f59835f18b07d7fbffc
NeedsCompilation: no
Packaged: 2026-05-30 08:59:28 UTC; root
Author: Mattia Pelizzola [aut],
  Kamal Kishore [aut],
  Mattia Furlan [ctb, cre]
Maintainer: Mattia Furlan <mattia.furlan@iit.it>
Built: R 4.6.0; ; 2026-05-30 09:03:47 UTC; windows
