# Generated by roxygen2: do not edit by hand

export("basis<-")
export("coeff<-")
export("dbasis<-")
export("measure<-")
export("ranks<-")
export(assignCelltype)
export(basis)
export(build_tree)
export(cell_map)
export(cluster_id)
export(coeff)
export(dbasis)
export(dcoeff)
export(factorize)
export(feature_map)
export(filter_cells)
export(filter_genes)
export(gene_map)
export(measure)
export(meta_gene.cv)
export(meta_genes)
export(newick)
export(normalize_count)
export(optimal_rank)
export(plot_genes)
export(plot_tree)
export(ranks)
export(read_10x)
export(remove_zeros)
export(rename_tips)
export(scNMFSet)
export(simulate_data)
export(simulate_whx)
export(vb_factorize)
export(visualize_clusters)
export(write_10x)
export(write_meta)
exportMethods("basis<-")
exportMethods("coeff<-")
exportMethods("colData<-")
exportMethods("counts<-")
exportMethods("measure<-")
exportMethods("ranks<-")
exportMethods("rowData<-")
exportMethods(colData)
exportMethods(counts)
exportMethods(plot)
exportMethods(rowData)
exportMethods(show)
import(S4Vectors)
import(SingleCellExperiment)
import(SummarizedExperiment)
import(methods)
importFrom(Rcpp,sourceCpp)
importFrom(Rdpack,reprompt)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
useDynLib(ccfindR, .registration = TRUE)
