# Epigenetic Dissection of Intra-Sample-Heterogeneity

## Documentation for package ‘EpiDISH’ version 2.29.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

CellDMC | A function that allows the identification of differentially methylated cell-types in in Epigenome-Wide Association Studies(EWAS)
cent12CT.m | Whole blood reference of 12 blood cell subtypes for EPIC array
cent12CT450k.m | Whole blood reference of 12 blood cell subtypes for 450k array
centBloodSub.m | Whole blood reference of 188 tsDHS-DMCs and 7 blood cell subtypes
centDHSbloodDMC.m | Whole blood reference of 333 tsDHS-DMCs and 7 blood cell subtypes
centEpiFibFatIC.m | Reference for breast tissue
centEpiFibIC.m | Reference for genenric epithelial tissue
centUniLIFE.m | DNAm reference matrix for 19 immune cell-types for blood of any age
ConstructDNAmPanel | Construct DNA Methylation reference Panel
DoMetaEfron | An R-function to perform a meta-analysis over multiple studies using an empirical Bayes procedure by Efron followed by Stouffer method.
DummyBeta.m | Dummy beta value matrix
epidish | Epigenetic Dissection of Intra-Sample-Heterogeneity
hepidish | Hierarchical EpiDISH (HEpiDISH)
LiuDataSub.m | Whole blood example beta value matrix