Package: EpiDISH
Title: Epigenetic Dissection of Intra-Sample-Heterogeneity
Version: 2.29.0
Description: EpiDISH is a R package to infer the proportions of a
        priori known cell-types present in a sample representing a
        mixture of such cell-types. Right now, the package can be used
        on DNAm data of blood-tissue of any age, from birth to old-age,
        generic epithelial tissue and breast tissue. Besides, the
        package provides a function that allows the identification of
        differentially methylated cell-types and their directionality
        of change in Epigenome-Wide Association Studies.
Date: 2026-03-13
Authors@R: c(person("Andrew E.", "Teschendorff", role=c("aut"), email="andrew@picb.ac.cn"),
        person("Shijie C.", "Zheng", role=c("aut", "cre"), email="shijieczheng@gmail.com"))
Depends: R (>= 4.1)
Imports: MASS, e1071, quadprog, parallel, stats, matrixStats, stringr,
        locfdr, Matrix, genefilter
Suggests: roxygen2, GEOquery, BiocStyle, knitr, rmarkdown, Biobase,
        testthat
VignetteBuilder: knitr
License: GPL-2
LazyData: true
RoxygenNote: 7.1.2
URL: https://github.com/sjczheng/EpiDISH
BugReports: https://github.com/sjczheng/EpiDISH/issues
biocViews: DNAMethylation, MethylationArray, Epigenetics,
        DifferentialMethylation, ImmunoOncology
Config/pak/sysreqs: libicu-dev libpng-dev libxml2-dev libssl-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:46:02 UTC
RemoteUrl: https://github.com/bioc/EpiDISH
RemoteRef: HEAD
RemoteSha: 589b6012433d6f0bfd57324b70793d1957db2ace
NeedsCompilation: no
Packaged: 2026-05-30 08:35:23 UTC; root
Author: Andrew E. Teschendorff [aut],
  Shijie C. Zheng [aut, cre]
Maintainer: Shijie C. Zheng <shijieczheng@gmail.com>
Built: R 4.6.0; ; 2026-05-30 08:36:54 UTC; windows
