Package: CellBench
Type: Package
Title: Construct Benchmarks for Single Cell Analysis Methods
Version: 1.29.0
Authors@R: c(
    person("Shian", "Su", email = "su.s@wehi.edu.au", role = c("cre", "aut")),
    person("Saskia", "Freytag", role = "aut"),
    person("Luyi", "Tian", role = "aut"),
    person("Xueyi", "Dong", role = "aut"),
    person("Matthew", "Ritchie", role = "aut"),
    person("Peter", "Hickey", role = "ctb"),
    person("Stuart", "Lee", role = "ctb"))
Description: This package contains infrastructure for benchmarking
        analysis methods and access to single cell mixture benchmarking
        data. It provides a framework for organising analysis methods
        and testing combinations of methods in a pipeline without
        explicitly laying out each combination. It also provides
        utilities for sampling and filtering SingleCellExperiment
        objects, constructing lists of functions with varying
        parameters, and multithreaded evaluation of analysis methods.
biocViews: Software, Infrastructure, SingleCell
URL: https://github.com/shians/cellbench
BugReports: https://github.com/Shians/CellBench/issues
License: GPL-3
Encoding: UTF-8
Depends: R (>= 3.6), SingleCellExperiment, magrittr, methods, stats,
        tibble, utils
Imports: assertthat, BiocGenerics, BiocFileCache, BiocParallel, dplyr,
        rlang, glue, memoise, purrr (>= 0.3.0), rappdirs, tidyr,
        tidyselect, lubridate
Suggests: BiocStyle, covr, knitr, rmarkdown, testthat, limma, ggplot2
VignetteBuilder: knitr
RoxygenNote: 7.2.3
Config/pak/sysreqs: libicu-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:49:41 UTC
RemoteUrl: https://github.com/bioc/CellBench
RemoteRef: HEAD
RemoteSha: 1afd28752fe95dd818da1b0e61de197e5617dff5
NeedsCompilation: no
Packaged: 2026-05-29 08:27:36 UTC; root
Author: Shian Su [cre, aut],
  Saskia Freytag [aut],
  Luyi Tian [aut],
  Xueyi Dong [aut],
  Matthew Ritchie [aut],
  Peter Hickey [ctb],
  Stuart Lee [ctb]
Maintainer: Shian Su <su.s@wehi.edu.au>
Built: R 4.6.0; ; 2026-05-29 08:29:44 UTC; windows
