add_new_exons           Add new exons
adjust_for_collision    Adjust for collision
debug_msg               Display debug messages if verbose allows it
extend_granges          Extend GRanges
extend_using_overlap    Overlap exons and extend three prime end
extract_last_exons      Extract last exons
filter_new_exons        Filter new exons for collision
five_prime_pos          Get five prime position
overlap_different_genes
                        Get overlaps from different genes
progression_msg         Display progression messages if verbose allows
                        it
three_prime_pos         Get three prime position
