Package: MDTS
Title: Detection of de novo deletion in targeted sequencing trios
Version: 1.31.0
Authors@R: person("Jack M..", "Fu", email = "jmfu@jhsph.edu", role = c("aut", "cre"))
Description: A package for the detection of de novo copy number
        deletions in targeted sequencing of trios with high sensitivity
        and positive predictive value.
Depends: R (>= 3.5.0)
Imports: GenomicAlignments, GenomicRanges, IRanges, Biostrings,
        DNAcopy, Rsamtools, parallel, stringr
Suggests: testthat, knitr
VignetteBuilder: knitr
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 6.0.1
biocViews: StatisticalMethod, Technology, Sequencing,
        TargetedResequencing, Coverage, DataImport
Config/pak/sysreqs: libbz2-dev libicu-dev liblzma-dev xz-utils
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:43:45 UTC
RemoteUrl: https://github.com/bioc/MDTS
RemoteRef: HEAD
RemoteSha: c8a8ac40b34ec3ca4b53fee0dd1342e2cd8edc40
NeedsCompilation: no
Packaged: 2026-01-23 08:33:28 UTC; root
Author: Jack M.. Fu [aut, cre]
Maintainer: Jack M.. Fu <jmfu@jhsph.edu>
Built: R 4.6.0; ; 2026-01-23 08:56:10 UTC; unix
