Visualization of Functional Enrichment Result


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Documentation for package ‘enrichplot’ version 1.31.4

Help Pages

as.data.frame.compareClusterResult Convert compareClusterResult to data frame
autofacet Plotting utility functions for enrichplot package
barplot.enrichResult barplot
cnetplot.compareClusterResult Category-Gene-Network Plot
cnetplot.enrichResult Category-Gene-Network Plot
cnetplot.gseaResult Category-Gene-Network Plot
color_palette Create color palette for continuous data
dotplot dotplot
dotplot-method dotplot
dotplot.compareClusterResult dotplot
dotplot.enrichResult dotplot
dotplot2 dotplot2
emapplot emapplot
emapplot-method emapplot
emapplot_internal emapplot
enrichplot_point_shape Predefined color palettes
fortify.compareClusterResult fortify
fortify.enrichResult fortify
geom_gsea_gene geom_gsea_gene
get_enrichplot_color Color utility functions for enrichplot package
ggtable ggtable
goplot goplot
goplot-method goplot
gseadist gseadist
gseaplot gseaplot
gseaplot-method gseaplot
gseaplot.gseaResult gseaplot
gseaplot2 gseaplot2
gsearank gsearank
gsInfo gsInfo
heatplot heatplot
heatplot-method heatplot
heatplot.enrichResult heatplot
hplot hplot
pairwise_termsim pairwise_termsim
pairwise_termsim-method pairwise_termsim
pairwise_termsim.compareClusterResult pairwise_termsim
pairwise_termsim.enrichResult pairwise_termsim
plotting.clusterProfile Internal plot function for plotting compareClusterResult
pmcplot pmcplot
ridgeplot ridgeplot
ridgeplot-method ridgeplot
ridgeplot.gseaResult ridgeplot
set_enrichplot_color Helper function to set color scale for enrichplot
ssplot ssplot
ssplot-method ssplot
ssplot.compareClusterResult ssplot
ssplot.enrichResult ssplot
treeplot treeplot
treeplot-method treeplot
treeplot_internal treeplot
upsetplot upsetplot method
upsetplot,gseaResult upsetplot method
upsetplot-method upsetplot method
volplot volplot
volplot-method volplot
volplot.enrichResult volplot