Package: NanoporeRNASeq
Type: Package
Title: Nanopore RNA-Seq Example data
Version: 1.22.0
Authors@R: c(person("Jonathan", "Goeke", role = "aut",
                    email = "gokej@gis.a-star.edu.sg"),
            person("Ying", "Chen", role = "cre",
                    email = "chen_ying@gis.a-star.edu.sg"),
            person("Yuk Kei","Wan", role = "aut",
                    email = "yukkeiwan622@gmail.com"))
Description: The NanoporeRNASeq package contains long read RNA-Seq data 
    generated using Oxford Nanopore Sequencing. The data consists of 6 samples
    from two human cell lines (K562 and MCF7) that were generated by the SG-NEx
    project. Each of these cell lines has three replicates, with 1 direct RNA
    sequencing data and 2 cDNA sequencing data. Reads are aligned to chromosome 
    22 (Grch38) and stored as bam files. The original data is from the SG-NEx 
    project.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R(>= 4.0.0), ExperimentHub (>= 1.15.3)
Suggests: knitr, bambu, ggbio, BSgenome.Hsapiens.NCBI.GRCh38, circlize,
        ComplexHeatmap, apeglm, rlang, rmarkdown, GenomicAlignments,
        Rsamtools
Enhances: parallel
SystemRequirements:
biocViews: ExperimentHub, ExperimentData, RNASeqData, Genome,
        SequencingData
bugReports: https://github.com/GoekeLab/NanoporeRNASeq/issues
URL: https://github.com/GoekeLab/NanoporeRNASeq
RoxygenNote: 7.1.1
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/NanoporeRNASeq
git_branch: RELEASE_3_23
git_last_commit: cd1349f
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-05-05
NeedsCompilation: no
Packaged: 2026-05-05 15:35:31 UTC; biocbuild
Author: Jonathan Goeke [aut],
  Ying Chen [cre],
  Yuk Kei Wan [aut]
Maintainer: Ying Chen <chen_ying@gis.a-star.edu.sg>
