Package: EMTscoreData
Title: Single-cell RNA-seq datasets of EMT responses from Cook et al.
        (2020)
Version: 1.0.0
Authors@R: c(person("Haimei", "Wen", email = "hudie.luoluo@gmail.com", role = c("aut", "cre"),
    comment = c(ORCID = "0009-0006-1600-1210")),
    person("Tian", "Hong",
           role = "fnd"))
Description: Provides 12 single-cell RNA-seq datasets profiling epithelial–mesenchymal transition (EMT) in human cancer cell lines (MCF7, OVCA420, DU145, and A549) under TGF-beta stimulation, kinase inhibition, and time-course conditions, as reported by Cook DP and Vanderhyden BC (2020). The datasets are distributed via ExperimentHub as SingleCellExperiment objects.
License: GPL-3
Imports: SummarizedExperiment, Seurat, SingleCellExperiment,
        AnnotationHub, ExperimentHub, ggplot2
Suggests: BiocFileCache, SeuratObject, knitr, rmarkdown, googledrive,
        BiocStyle, testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews: ExperimentHub, SingleCellData, ExpressionData, CancerData,
        RNASeqData
URL: https://github.com/wenmm/EMTscoreData
BugReports: https://github.com/wenmm/EMTscoreData/issues
Encoding: UTF-8
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-05-05 15:18:23 UTC; biocbuild
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/EMTscoreData
git_branch: RELEASE_3_23
git_last_commit: 25d2ca8
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-05-05
Author: Haimei Wen [aut, cre] (ORCID: <https://orcid.org/0009-0006-1600-1210>),
  Tian Hong [fnd]
Maintainer: Haimei Wen <hudie.luoluo@gmail.com>
