org.Hbacteriophora.eg.db
This is the released version of org.Hbacteriophora.eg.db; for the devel version, see org.Hbacteriophora.eg.db.
Genome-wide Annotation for Heterorhabditis bacteriophora
Bioconductor version: Release (3.23)
Provides genome-wide annotation for Heterorhabditis bacteriophora, primarily based on mapping using custom gene identifiers. This OrgDb annotation package is intended for use with AnnotationDbi-based tools and supports querying of gene identifiers and related metadata.
Author: Lalson Wesly Johnson [aut]
, Chaitra Ganapati Bhat [aut]
, Adler Dillman [aut]
, Vishal Singh Somvanshi [aut], Kabilan S [aut, cre]
Maintainer: Kabilan S <kabilan151414 at gmail.com>
citation("org.Hbacteriophora.eg.db")):
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("org.Hbacteriophora.eg.db")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("org.Hbacteriophora.eg.db")| Annotation Package for Heterorhabditis bacteriophora | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | AnnotationData, AnnotationHub, OrgDb |
| Version | 0.99.1 |
| License | Artistic-2.0 |
| Depends | R (>= 4.5.0), methods, AnnotationDbi(>= 1.68.0) |
| Imports | DBI |
| System Requirements | |
| URL | https://github.com/kabilanbio/org.Hbacteriophora.eg.db |
| Bug Reports | https://github.com/kabilanbio/org.Hbacteriophora.eg.db/issues |
See More
| Suggests | BiocStyle, knitr, annotate, RUnit, dplyr, AnnotationHub |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | org.Hbacteriophora.eg.db_0.99.1.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Package Short Url | https://bioconductor.org/packages/org.Hbacteriophora.eg.db/ |
| Package Downloads Report | Download Stats |