5d4bf4915d87f4977703cac5092b8346 *DESCRIPTION
c018f11f7da418fa3559f1ae5a4c9ec4 *NAMESPACE
0b42078aad89eafc39761653ed7b96ce *R/functions.R
b1c61f42c5d8a7fd3dd472e4cc450bc0 *data/es.mef.small.rda
ea7450fe496ad8fc9e70e7887dfc84c8 *data/knn.rda
20f232075d8817083424d6ba0f6b8bc9 *data/o.ifm.rda
4d366132a294835560d5e8faa0b889f5 *data/pollen.rda
5f7e41611be0599cb94ac6cecd2d632b *data/scde.edff.rda
67f847a1683cb54f1f09e2e3ce01aebb *man/ViewPagodaApp-class.Rd
c7b966e974ce8dae4aef91e2a4dd25cf *man/bwpca.Rd
4914f0b487f4c11e7cf82033684bfc69 *man/clean.counts.Rd
e0f485cab34dd49ae43d64fa54326e06 *man/clean.gos.Rd
9da6626a219090b72e195583091bff8f *man/es.mef.small.Rd
461de77812f837b7aaddd43afdd5356e *man/knn.Rd
a2e2ea8f5969cce26361a1b6544acc12 *man/knn.error.models.Rd
03785b4b2878d6bc8862040576fb93e5 *man/make.pagoda.app.Rd
49527aab10cad9da564f141aa65481b6 *man/o.ifm.Rd
9ab77f00929e87f36d4ef2d7312ae531 *man/pagoda.cluster.cells.Rd
0e58db9e4ba86490611cbfbc43e96eef *man/pagoda.effective.cells.Rd
aaf0575e1e9aadc6c89d08e9c5788f2d *man/pagoda.gene.clusters.Rd
da2dfd8b99517fd752d9107b3e84365b *man/pagoda.pathway.wPCA.Rd
61c98c09371643743db7cb885649aa80 *man/pagoda.reduce.loading.redundancy.Rd
561d056b5a6681e367bb01501f6992ff *man/pagoda.reduce.redundancy.Rd
075d086303547e464bf54f5c222c75e7 *man/pagoda.show.pathways.Rd
3d7dffedabed01a10d15f855c3868885 *man/pagoda.subtract.aspect.Rd
c09bf18debc1d2528170af749e02be78 *man/pagoda.top.aspects.Rd
26361b9419b14a6380032c1a5a05a4d2 *man/pagoda.varnorm.Rd
b08d125797ba172a3dafe2530d1d56f7 *man/pagoda.view.aspects.Rd
55d0f3938e0f05bff9e2bf339c9cbf89 *man/papply.Rd
09c849aae3fd08ec35d41fe321b7d4a1 *man/pollen.Rd
44577b6eba56b93ca464f70cccbbb4f0 *man/scde.Rd
32b4aa20d06e104e1166553395706026 *man/scde.browse.diffexp.Rd
6b95693ca67fd571d619da570e1347f8 *man/scde.edff.Rd
b9bc2047a6251e065191adb5f443de65 *man/scde.error.models.Rd
60f5a46d047a758bc3ff9c825ad3ef96 *man/scde.expression.difference.Rd
34ed153603e68a390971a13a4e54d23b *man/scde.expression.magnitude.Rd
ef517c1c39925673c6b9e72d09e505aa *man/scde.expression.prior.Rd
2d04af8387369ab97222ffdece4972b4 *man/scde.failure.probability.Rd
f684556f5952feb4fdb3f3fc4560a3a8 *man/scde.fit.models.to.reference.Rd
44fc0908a43ed8bf9b2fa10c3e309ce2 *man/scde.posteriors.Rd
bbdd5885997941eb969a865f24969555 *man/scde.test.gene.expression.difference.Rd
2ddd6fe00ac7a25d69b4ade5851c53fd *man/show.app.Rd
8a9ccebe83fe3dd78c384f9e8919aba0 *man/view.aspects.Rd
49555daaa3cf048c35abfe8d578612a2 *man/winsorize.matrix.Rd
5505c2e8a7cb5cf0c951c766d956b9e0 *src/Makevars
4225f594a90d1b1f09b40bb0bcc29703 *src/Makevars.win
97188ae43e4ea03d11654518b73c540d *src/bwpca.cpp
6a67cb3d66b6b496847432470e050c25 *src/bwpca.h
8f76a15e82540436a1a9932fe15e5a37 *src/jpmatLogBoot.cpp
c5ebd39642760511c1f508feb9cd842c *src/jpmatLogBoot.h
2e8079d9036dfd11496f43c7b00892b7 *src/matSlideMult.cpp
e331f5889d2c076817a401a8c34e9f35 *src/matSlideMult.h
2a4439513df32a5a0299fcfd4ffcf0c0 *src/pagoda.cpp
baa57ad9d745ed6ba3dea295cfc6123e *src/pagoda.h
92ad5a377282deb662df86f2e21e6881 *vignettes/diffexp.Rmd
31f4528f8f0d89dcb72198729af93464 *vignettes/pagoda.Rmd
