pandoc: 3.6.4
pkgdown: 2.2.0
pkgdown_sha: ~
articles:
  articles/Attaching_SC: Attaching_SC.html
  articles/Clonal_Bias: Clonal_Bias.html
  articles/Clonal_Cluster: Clonal_Cluster.html
  articles/Clonal_Diversity: Clonal_Diversity.html
  articles/Clonal_Dynamics: Clonal_Dynamics.html
  articles/Clonal_Visualizations: Clonal_Visualizations.html
  articles/Combining_Contigs: Combining_Contigs.html
  articles/dandelionR: dandelionR.html
  articles/FAQ: FAQ.html
  articles/Ibex: Ibex.html
  articles/immApex: immApex.html
  articles/immcantation: immcantation.html
  articles/immGLIPH: immGLIPH.html
  articles/immLynx: immLynx.html
  articles/immReferent: immReferent.html
  articles/immunarch: immunarch.html
  articles/Installation: Installation.html
  articles/Loading: Loading.html
  articles/Processing: Processing.html
  articles/Repertoire_Summary: Repertoire_Summary.html
  articles/Running_Escape: Running_Escape.html
  articles/SC_Visualizations: SC_Visualizations.html
  articles/tcrpheno: tcrpheno.html
  articles/Trex: Trex.html
  vignette: vignette.html
last_built: 2026-04-03T15:49Z
urls:
  reference: https://www.borch.dev/uploads/scRepertoire/reference
  article: https://www.borch.dev/uploads/scRepertoire/articles
