c930feb3dc68c56a4ba18d4e1fe5b8f0 *DESCRIPTION
df808fd2339b832b5b815e9d1378f4f2 *NAMESPACE
96a4b08e3623b8c73461caeb35f32a8d *NEWS.md
e67f8eddb275a63db2ae40e6aadda110 *R/abstract_search.R
75ca61d1892cb6544d98cddf1eaf2e1d *R/add_metadata.R
60c074018041ef3ae690eabeef9930d1 *R/add_predictions.R
30bc795ba082a7d09e05db6a1e9a2d60 *R/all_metadata.R
a0c81b60f18fdb59147592cb2c2acd3f *R/browse_study.R
e214e33f5a865adb04e5d086f9fa0dfc *R/coverage_matrix.R
6dc8aa0f4e3119c83c34816221b6a652 *R/download_retry.R
499379241959f8a98ee3fc26f837155f *R/download_study.R
bfe767d9c4692cc4c51cbc521b62b2f4 *R/expressed_regions.R
e96866323a84ffd514785901bb478127 *R/find_geo.R
926b5e24d309a91076ee321c9c66ffec *R/geo_characteristics.R
fdad7deeb613a462e5f85d210f2d7603 *R/geo_info.R
5c55c30ecec5fb6947c1561e35f89ac1 *R/getRPKM.R
14640aa4366048b55d66c828740224c4 *R/getTPM.R
114baa1b751a509e77fb4964db6e21f4 *R/read_counts.R
e0ef681901465d24f47f9139cb2c086a *R/recount-package.R
b3fda9659a229f7179416afb1738efbd *R/recount_abstract-data.R
5f23e1d833e02355051b86bc4b418ae1 *R/recount_exons-data.R
c5c317ce0ecba70c3640ac5fdea20c4d *R/recount_genes-data.R
f643448033f7223dc4739a7aa8bddf2a *R/recount_url-data.R
46d62477d0b8fc4d3a6242004af92d93 *R/reproduce_ranges.R
2dd325480f6ae880ee4c5a88eb4914b4 *R/rse_gene_SRP009615-data.R
aaad5c5c556e5e3d7b92e7f090fbc9bb *R/scale_counts.R
69ff2d9610d37b6c5ccd0b960508535c *R/snaptron_query.R
6406a02fedb08a535971efd1139d429c *R/utils.R
5f00824b96ce9fb4650d517c298a8529 *README.md
2e597c6800c44058747e66258e1552e4 *build/vignette.rds
7acb9df63d5e45e9677cb7e1843b7aaa *data/recount_abstract.RData
72b13338d7cc9d9577c0292657be78a6 *data/recount_exons.RData
0a42a8310e80edb7a1691c6dc076acdc *data/recount_genes.RData
7d0ed9eed894d6e9e8f7f7eedf318b13 *data/recount_url.RData
4013cbfb97fb86aaffbc8b9b9a421218 *data/rse_gene_SRP009615.RData
6a03e320ff6c46ab120257724dfa883d *inst/CITATION
4126f258fdb559dc053f449978ee8c78 *inst/doc/SRP009615-results.R
679fd6d915fc79acfb2d725abb3dfcbc *inst/doc/SRP009615-results.Rmd
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c9861653e699ba13ec2e20ede15e856a *inst/doc/recount-quickstart.Rmd
9f172d457cf3e2f7f6283db2f92a2ffe *inst/doc/recount-quickstart.html
8fb223561d7aea7d3a3f2c3e3143fa98 *man/abstract_search.Rd
c367ae9dfc5534f72754df1a632a15ac *man/add_metadata.Rd
9040d4b94456dc9871d386a7aaad11f8 *man/add_predictions.Rd
36c57d5671c12460148b24972ae4e5ec *man/all_metadata.Rd
ec0a6683c69e29239a49f58df256554c *man/browse_study.Rd
9b289cd62407ed6f94f860e34ea4e7a8 *man/coverage_matrix.Rd
ecdd5a5226335916cca8ed9b00484ae3 *man/download_retry.Rd
1708c7a660919f1107cf5351b19324e1 *man/download_study.Rd
90a061ed222030353a88722f56c7a42c *man/expressed_regions.Rd
865a63c2b51919a59f02bf6114640ee5 *man/figures/logo.png
9e47d43f723ad0c1c81c3317f24c6550 *man/find_geo.Rd
c32250268aef854815c2d82af8f9d9bd *man/geo_characteristics.Rd
c6ea5a4441ebb5b59a3cd28322010245 *man/geo_info.Rd
0fbb0ea8a0cff134fcfe9400d4b60932 *man/getRPKM.Rd
ecff5583f275abf9ac96cf2fe02b108d *man/getTPM.Rd
31466151ad6ee17505d240a266c4ca0e *man/read_counts.Rd
c46c5e6e9538f343ba87726a342b7630 *man/recount-package.Rd
9076b04c6309f3125d93efb4f7eed007 *man/recount_abstract.Rd
272659998d80f2a6e1cf2c10971a50b8 *man/recount_exons.Rd
96146513a51e617b2692e10902339d57 *man/recount_genes.Rd
1ff0d6fa11656909d92b13efe5cfa20d *man/recount_url.Rd
dd8196797bde1e129ddc11bbc82025b1 *man/reproduce_ranges.Rd
d6c673d0db81e4fb5d994511157edf3c *man/rse_gene_SRP009615.Rd
06f45dc74a58008ae877bd07094eb909 *man/scale_counts.Rd
df70440d0bcfadd20ace9bc8404be427 *man/snaptron_query.Rd
972ce32a204fa5de583827e312a077a0 *tests/test-all.R
cb4834a30578af20e291db06975b1711 *tests/testthat/test-annotation.R
cffa50e06fb0506e4c2aa7fc57f01adb *tests/testthat/test-data.R
4534614042efc7b94cac68fd5f384f02 *tests/testthat/test-download_retry.R
b05cc344d898340cc5ad27d127969013 *tests/testthat/test-misc.R
2036b4c1b2c73d5931cd7f230f47195d *tests/testthat/test-web-metadata.R
e226266722b35cf21420fb15ca7e9d31 *vignettes/Makefile
679fd6d915fc79acfb2d725abb3dfcbc *vignettes/SRP009615-results.Rmd
3c83a74b8d515a9dac168f7dfc28ab7e *vignettes/SRP009615-results.bib
679fd6d915fc79acfb2d725abb3dfcbc *vignettes/fakeVignettes/SRP009615-results.Rmd
c9861653e699ba13ec2e20ede15e856a *vignettes/recount-quickstart.Rmd
