f85482bca8108fabc397e0dabc3cba32 *DESCRIPTION
a254ba4b8b7dfed1ff88a1adf7d454b3 *NAMESPACE
777bf56b0374b92635a3c8fbb91e9635 *NEWS.md
e8a2deb33dc7c97dd036fedbca1d2b0a *R/annotation_ext.R
d8871361e80aa25975eb2a97cf60b9b5 *R/annotation_options.R
ad2bc52e5abb3d939d6d07a9e87cfed7 *R/available_projects.R
56e8aeecef79855948bb9b312a2681dd *R/create_hub.R
6c04fa669abad531f580cf3e15ac2681 *R/create_rse.R
fca2c85391496aee98cb061d629aeab8 *R/create_rse_manual.R
3a0f6502c65123d253cdcec40c8f019c *R/expand_sra_attributes.R
b1d56ba3a81d7e5ac1dcf85687159c51 *R/file_retrieve.R
d323e7a0f69cc80cd237e7e8580f3b46 *R/locate_url.R
b61461e388d58ebf40151fa933312515 *R/locate_url_ann.R
1deb99602a2f2b7d181b8f5301cbfeff *R/project_homes.R
7117f02bbfe31b36acda3c7fbc9ee385 *R/read_counts.R
8470711adf676aacb58e624ed94bf9ce *R/read_metadata.R
e0ef681901465d24f47f9139cb2c086a *R/recount3-package.R
e81606a29fe9119afe3e0356db09695d *R/recount3_cache.R
689e0bf5ce667a55155e1aac9fa70f32 *R/recount3_cache_files.R
f84bc11da3074e396e13ba823e6062c7 *R/recount3_cache_rm.R
f9ce1605290babb19313994ea1181bcc *R/transform_counts.R
841d2b8780a50148a8087338aef25f31 *README.md
d9a9a30e58f271dfc3ddeaa80f3544fd *build/vignette.rds
777b2fa9c633edb2f7e513232f85fb2e *inst/CITATION
8b5b4f5803fe7b3139b85a23097766da *inst/doc/recount3-quickstart.R
3f5fceb1dfb86716fb0ecdaebe1f34d9 *inst/doc/recount3-quickstart.Rmd
e8e8135b154258f16b54390f4f2cae73 *inst/doc/recount3-quickstart.html
5a2847e6b3748cbe428de0cb47f3260f *inst/scripts/make-data_project_info.R
fa50d5c81a88a6ad4c05ec114203a65e *inst/scripts/make-metadata_project_info.R
7ac497048fff0c7873d8cbb1b089f3c6 *inst/scripts/make_data_project_info.txt
8856248e0b6fd49e917c63fdba098cbd *inst/scripts/make_metadata_project_info.txt
ded2e46ec9cbf058714e1a35e661d8ed *inst/test_files/9f5117afed21_sra.exon_sums.DRP002835.ERCC.gz
df391029dcc849cc9d5f8754afb3f52c *inst/test_files/9f51224769fb_sra.recount_seq_qc.DRP002835.MD.gz
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5279546034deff50a76736f0345c50b5 *inst/test_files/9f517e7eef51_sra.recount_pred.DRP002835.MD.gz
320a3ceb895f6e512fcda0a768f55e43 *inst/test_files/9f51a3cdecd_sra.recount_qc.DRP002835.MD.gz
8ff8b4369cd1ec88f0b873d7694a5ce0 *inst/test_files/BiocFileCache.sqlite
d9ca983c9940976272b4e85d90ae1422 *man/annotation_ext.Rd
36560f058d3ed4ab19acd7c039e3f238 *man/annotation_options.Rd
16fdfa4022ed243df87d6b26c6e8eafe *man/available_projects.Rd
ad8020396b31e5ec27216bb1d4e854d5 *man/available_samples.Rd
bcd2c63505753e499598b5bd5e6898b9 *man/compute_read_counts.Rd
5a31988f946c2e097fc75dbf7270846b *man/compute_scale_factors.Rd
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3532069e1fc144d2c3ce7eca558bf006 *man/create_rse.Rd
0f6bfa4869994d66a8e72345de8b47fd *man/create_rse_manual.Rd
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67f4e710c5c2b1409bb0cec63632bf45 *man/locate_url.Rd
9fc109f5df6c6eb7cca8a1f4e1a46412 *man/locate_url_ann.Rd
deea57c6ea1cdeb6feac365c30efddd8 *man/project_homes.Rd
4d98bdfce61d019c31e81d3775d502d6 *man/read_counts.Rd
126ebe07440e6764f4cced82faecceff *man/read_metadata.Rd
6103787a27e9c1bf9a73aa3d923ac93f *man/recount3-package.Rd
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1bea348e97823fd4459f5d8e990ad4ea *man/recount3_cache_files.Rd
cb7edfb1eacbf9073618306b91fe846e *man/recount3_cache_rm.Rd
0fbe07bf124c255c77cab0d41b9db478 *man/transform_counts.Rd
91386c6e369e6942f550ad1732235a76 *tests/testthat.R
36cbd81226b4bb8322c3ca33eebff00d *tests/testthat/test-annotation_ext.R
1b7b7158cdffc3df69a8c6658f6c921b *tests/testthat/test-annotation_options.R
66ee151deff7a84f2038e6f44e3dfc7e *tests/testthat/test-available_projects.R
419c0847ef65653ae5f67848a58257af *tests/testthat/test-citation.R
818b8f063c55367fec0cc1112c9d32a6 *tests/testthat/test-create_hub.R
d479776863546e89f180484b156fca68 *tests/testthat/test-create_rse.R
791429b6df3710c03ee8bc7f9c1ba6e0 *tests/testthat/test-create_rse_manual.R
6a481469b1484e6cf308c0be5ecf7cca *tests/testthat/test-file_retrieve.R
973c8b7e20e32caa5ff41e56376dfd50 *tests/testthat/test-locate_url.R
8b076aa44b1d15f797e998ddaf439204 *tests/testthat/test-locate_url_ann.R
6552137772321cbc32cab96a5e5e44c5 *tests/testthat/test-project_homes.R
9545ad2b544a99aeb8db401de5e2932f *tests/testthat/test-read_counts.R
1b9cf34a96ffafa877aee0fccabc9355 *tests/testthat/test-read_metadata.R
97c32f58f4bba59e568ba5d8c7575cb8 *tests/testthat/test-recount3_cache.R
d8acdd4195652a2957dba21148484ec1 *tests/testthat/test-recount3_cache_files.R
54be7c87ee4173748dbd7f6b0eac5a06 *tests/testthat/test-recount3_cache_rm.R
f0fe027516bb542df1cf5213b86702e6 *tests/testthat/test-transform_counts.R
3f5fceb1dfb86716fb0ecdaebe1f34d9 *vignettes/recount3-quickstart.Rmd
