0ad802c4a59f5bc90a36179816ec528e *DESCRIPTION
ee144ea134fe64a93cab0ee8e3d8374b *LICENSE
e39389446db66621f2fee6cf5e90722f *NAMESPACE
a75555f457cace0aa5ea06d3e8269b18 *NEWS
0120e083d39ec07fa148c4a6e41cb9d5 *R/PQSViews-class.R
46243e843b758c7fb2b5676204062ba6 *R/RcppExports.R
5017e2aedfce78716d0c8d4061ef1005 *build/vignette.rds
db620292eb17b9bd0c214918009f85bb *cleanup
db620292eb17b9bd0c214918009f85bb *cleanup.win
926d4ec073e6df021567fc45d738f729 *inst/CITATION
c65f60194680c931cef9a7f8c75704cd *inst/doc/pqsfinder.R
16a94dba5613d309607604da1b3484cd *inst/doc/pqsfinder.Rmd
e4b3b0b7c9dbe8bb4012b58f0f7668b1 *inst/doc/pqsfinder.html
7347193b25a817dd8ebe4d7dc7f6d5d9 *inst/extdata/gtrack_ahnak.RData
8eb872ba036b13e97cbaa40ba2927e17 *man/PQSViews-class.Rd
789a959b64146d0a0e861977c46d00ff *man/PQSViews.Rd
0eb6d16b7428e30b33638e1fad80799e *man/as.character-PQSViews-method.Rd
cdd934e56b3ab90f74f03c714ca118a8 *man/density-PQSViews-method.Rd
8f879d189f3c65b3bae27c7b10cbe03a *man/maxScores-PQSViews-method.Rd
47e7ef2d22a5e2ac879a2ab707254261 *man/maxScores.Rd
06065526a01bf803cf6b139b8a6699de *man/pqsfinder.Rd
61fddb2ba3c8b67b1d02f6505e703b86 *man/score-PQSViews-method.Rd
79910be2d1019cd48d974c1691850a7f *man/show-PQSViews-method.Rd
7c399a816cfd1fa33495995070f942a2 *man/strand-PQSViews-method.Rd
3a8a3284d22428d538a8a9471eedce8a *src/Makevars
cad483371b0d83f9d0a6404d09ed6269 *src/RcppExports.cpp
363af673714088da89eff65f958924ef *src/boost_regex/internals.hpp
6a6e7129cfda943c7ad15c268f2e770b *src/boost_regex/posix_api.cpp
38f9025f71a5e58c6c17a1d3cddb6881 *src/boost_regex/regex.cpp
c4a591a2da36726103316173fe31803d *src/boost_regex/regex_debug.cpp
ac7bca790d5d52f70778c9e767c0c4ab *src/boost_regex/static_mutex.cpp
14ea589c73491683d8fdba681f077afd *src/boost_regex/wide_posix_api.cpp
6e5ee40901506e37ef589bc581f26dfb *src/features.h
459218804e0d1745ae7ca61e8df42282 *src/opts.h
e121a3c8cb489bcbdd937ece6b36f7ed *src/pqsfinder.cpp
3c1255509cd593053e69506e37278409 *src/results.h
dba512eb224c38936ba4afca1c5beb4b *src/run_match.h
d58e844ca9e632b1740710066b5dc7c3 *src/scores_buffer.h
885af7f85af9a7babcd3cc6b915e5331 *src/scoring.h
c6983e222d2a7759493238bd808d7409 *src/storage.h
7ca0f20afaa280c9cb5ba881ba93c1a1 *tests/testthat.R
c24b329dff472c86f7f799512f3e4f82 *tests/testthat/pqsfinder_1_4_4_patched.RData
dac7c2f192678d19d629a6d359bcbf1e *tests/testthat/test_exhaustive_search.R
b1b4d63417b00eebb63a14d30750cf4c *tests/testthat/test_long_non_guanine_seqs.R
b1e435295fe98338fbfce5349bdfdafe *tests/testthat/test_regressions.R
fcb5f3138e6889c18f8cac1e289aea46 *tests/testthat/test_zero_loop.R
16a94dba5613d309607604da1b3484cd *vignettes/pqsfinder.Rmd
4466c14635a702ba292ecbc17aff3547 *vignettes/pqsfinder.bib
