bbe63d9d7bda304db0ced8d728095959 *DESCRIPTION
d8174258590d6cbf2c44ab48b7e77572 *NAMESPACE
72b0fe00fe39a4aedb3963c50c13d3e7 *NEWS.md
642e8e9594cdd228224c98bf67b301f6 *R/AllClasses.R
4dedffec045dbd8f9ccbc35779b0e281 *R/AllGenerics.R
7ea445f4c6228ab714af3b9d37fee3d5 *R/add_pairdist.R
24b12be84f78cc64df63f543232113a9 *R/anchor.R
f5dc2597b554f456170fdb02f89547fc *R/annotate.R
c214892bbf21999eb77f96c61ba14663 *R/arrange.R
fa0e883aab72d64f070aa96aecf4536b *R/count-overlaps.R
e78ce00553e108ccec5f9fc2d5e46bf4 *R/count.R
de3d5e3483a2c4ed9235509a7055feac *R/data.R
2e701c414ea3dc7889f13d76141ed3e1 *R/export.R
9b11c74b0f800073e2870a9ad4f0088d *R/filter-overlaps.R
b29f7f850e51f2595228176f1480b5dd *R/filter.R
5bd89cdfb282a3b67309c6c305b2c616 *R/find-overlaps.R
198e7eb2cc61402d45a3c5efd724c7db *R/flank.R
52d12c92b2a5db9fc515b726546cc1a4 *R/ginteractions-construct.R
f3823cf574585c8269b2702e05c0e01e *R/ginteractions-env.R
61f8714e4e5761938b9734edab2c5015 *R/ginteractions-getters.R
98f1fff0b7ff5af9894009cd16dcd181 *R/ginteractions-scoping.R
5148194abafe8bc60600c6d2502abcf6 *R/ginteractions-setters.R
67e80e0f80983e2253f46f72a3d597bc *R/group_by.R
ba4b32257de5bed987b59c443fff21f2 *R/group_data.R
8fbd8613a122b6dc29f7b3fd8bc60cc9 *R/internals.R
ede73cdc6cc5e69fabbb58bca937ddf3 *R/join-overlap-left.R
2e125337562e4a5dbc06090ae661d894 *R/methods-AnchoredPinnedGInteractions.R
7c00f58213dffdb62f53974143fbf37c *R/methods-DelegatingGInteractions.R
d31339b530cea91c9cc0782bac43799f *R/methods-GroupedGInteractions.R
24076f0326965c664dbdd66dec978284 *R/methods-PinnedGInteractions.R
797107ccbeef1679e79851e976d10bfb *R/methods-show.R
1df86bb52b3d59e80e0772850fcc2654 *R/mutate.R
0efcd3252b82835d4fb9101a408d4cc2 *R/pair-granges.R
3f5c7e37f8efcb519d0d53669b09f5cd *R/pin.R
8f75675a5160055f0e5ee584bfd7a59a *R/plyinteractions.R
b399b8cf888a9e0185ce939172b9c906 *R/reexports-dplyr.R
6819b99d2c3103addfccd8dcbaf5e419 *R/reexports-plyranges.R
a9c56ac960d3f32fe94e897eb53ab61d *R/reexports.R
cc7daac3393c263f52c0a7112f80484a *R/rename.R
935d7e9dd000dfb0cf41cb76956ae2ff *R/replace-anchors.R
6dcd064f5225aeeafcdec59fa65fd4c1 *R/select.R
1e22b1cc57b456a9cf8b368c11e9bd14 *R/shift.R
f46ecc4dce824e99ba8e9513b5dfe4d2 *R/slice.R
274ec630d29d2846ba457fdb959c0c46 *R/stretch.R
140756836f19f458bc919a35d2d9469e *R/summarize.R
f1e8cd51f0f2ff034309bdebfa26a5d1 *R/tbl_vars.R
6c8ed00a304e64f7cb8c624366a3caa5 *README.md
4c68911b2cf5ee56b7e521b6e42dfde0 *build/vignette.rds
45cf8906a9c85930e1e32b5fd682b3ab *data/GM12878_HiCCUPS.rda
d912604b8200da778ecd70629e3dd2dc *data/ce10_ARCC.rda
e336af6a19c54b9e45e7e13b894d17b8 *data/ce10_REs.rda
67009641b7cd531fdcda388549d421a5 *inst/doc/plyinteractions.R
0587892b6f6d14020b48db6bf5fb86d7 *inst/doc/plyinteractions.Rmd
0b0c78a0e96300bdea81882e25f28dd6 *inst/doc/plyinteractions.html
76776962e17ad85c9692d4a5cf9e556b *inst/doc/process_pairs.R
5b97a6c634e02813a3c863f88866300a *inst/doc/process_pairs.Rmd
f939dd2e4705cde0f08890f93880ba05 *inst/doc/process_pairs.html
643c5d27c6d514e900f7be8c729fff45 *inst/extdata/pairs.gz
6706951a0d6c1f892cac2ccc6ffea25d *inst/scripts/GM12878_HiCCUPS.R
1cb80874931a0da113f5b59181e4bbb3 *inst/scripts/ce10_ARCC.R
25bd5975cd6e5d0df84bbcffd71567f4 *inst/scripts/ce10_REs.R
d7f5cd339686197dc3c37c0338ee652e *inst/scripts/pairs.gz.R
8178bb6de65a751f0f7d134a4d6d250e *man/GM12878_HiCCUPS.Rd
3e86cd85b2f089b4915566c431f799f2 *man/add-pairdist.Rd
d69d3a04b797860292c246acf68441e9 *man/ce10_ARCC.Rd
569c5e4155f9a1335df6abba93b0ce03 *man/ce10_REs.Rd
aefa4283797cc1916fce2e7d601bb159 *man/delegating-ginteractions-methods.Rd
45423368fa916291df087f4845056855 *man/dplyr-arrange.Rd
8f09c87e40a953880f63b99e2e92f757 *man/dplyr-count.Rd
a117dd4665bd73455b034a259689027f *man/dplyr-filter.Rd
8d53e2d46aab22073c2ae593091aacfc *man/dplyr-group_by.Rd
648e0f1c7f9de25c52d6ee814b11bf5f *man/dplyr-mutate.Rd
41b93f0c05d6c862ca945fee57b259b9 *man/dplyr-rename.Rd
cf20ae0b2ba1f7ed3ab77428946b80bd *man/dplyr-select.Rd
b449e019ae5d50401349daea9a88f932 *man/dplyr-slice.Rd
9bf6a59c8c1c09a04ce0d0094c0dc3a9 *man/dplyr-summarize.Rd
7257d2463260b1912749e777c4f10ec9 *man/figures/classes.png
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1f7be9d552971f9a1bfb74451263ed60 *man/figures/logo.png
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216ff27b9b0a44fce16c7265747ad5fc *man/figures/stretch.png
29d17cc5304fd8af99d0360d1a58b1d3 *man/ginteractions-anchor.Rd
e38510fc700bce8786d4138b3d2d6aa6 *man/ginteractions-annotate.Rd
c59a2c92f042443e081f591aecddccee *man/ginteractions-construct.Rd
004065f287d503b89029897fc9c6e5e5 *man/ginteractions-count-overlaps.Rd
4fcbcd2150828a7381dae9b87a23fa4e *man/ginteractions-export.Rd
96acd36769d1afc0259219f80e1eafc9 *man/ginteractions-filter-overlaps.Rd
e5f20ac3916835d0e883992918056db2 *man/ginteractions-find-overlaps.Rd
e9b76763bca4d79068e422ef34cf2441 *man/ginteractions-getters.Rd
1442e5ccbe57c4d95b6c2a0a3158404f *man/ginteractions-join-overlap-left.Rd
3be49062febe51e0fdef76cedd1523b1 *man/ginteractions-pin.Rd
c099ad5b1bc55078fc53e877e93be856 *man/ginteractions-setters.Rd
d62a4b88156862e9d75df365a98aab0f *man/group-group_data.Rd
28caeeeb48390c94167f1d32717bb20c *man/pair-granges.Rd
d61250bd9197656e36af98816136938c *man/plyinteractions-package.Rd
92ecd531ab8622c6f6e0a87ca5694d54 *man/plyranges-flank.Rd
501904e832304eaa2cfaacd6c4615eb2 *man/plyranges-shift.Rd
40571d7c8a6fcf5b41097bef3417b516 *man/plyranges-stretch.Rd
55e5a92f5a2b904abef10238c25c8dc3 *man/reexports.Rd
47168e992c92e1ab2ce28e791e4b4cf1 *man/replace_anchors.Rd
62d82163effbd3b71761453ca3e320e4 *tests/testthat.R
bc3f876335c5d086a22dcaeff1acf969 *tests/testthat/setup.R
15fe53a0c3f84c2a306b44bd2067918c *tests/testthat/test-anchors.R
f8c2d82f4dc3178a0238021a27a9c63f *tests/testthat/test-classes.R
54e03dc70a9f81082f5d3dd6e7e61cf0 *tests/testthat/test-dplyr.R
e1746fd183e14f5d3d775ab0daa48006 *tests/testthat/test-enrich.R
f14bc329e53b3d464de38b95c978248b *tests/testthat/test-export.R
f09302e23730b56dbc6efda182cd597b *tests/testthat/test-getters.R
a4c78058285424b60769ec89f7f95898 *tests/testthat/test-overlaps.R
1aa4a7b65a03498e9e345e6d1d2d79cc *tests/testthat/test-plyranges.R
155fafefd342957c5ade661dd4c6e249 *tests/testthat/test-setters.R
0587892b6f6d14020b48db6bf5fb86d7 *vignettes/plyinteractions.Rmd
5b97a6c634e02813a3c863f88866300a *vignettes/process_pairs.Rmd
