202e9d780611cdc255ab62d99a9c1d22 *DESCRIPTION
f3bf00e1abb89b6eaceaf79c614c9c83 *NAMESPACE
a4d4bff34ae30665c84970d0af395248 *NEWS
5ac5d166e18963bd72ed3e6da01194df *R/00_export_getAutoRIF.R
687581338f58e3872652089a6a0f027c *R/00_export_prepEsetViewer.R
3887a23a4e81b68cf650fa47e47f2eca *R/00_export_runExpressionSetViewer.R
2598863edcd3cb3560dc76bfb39b6f1f *R/L0_module_app.R
c2fc13027853efb2b0ef064dc7b168da *R/L1_module_data_space.R
37cab068fe4e805c32300f0a6a51e41b *R/L1_module_result_space.R
8aea3e0021457422a5f2035eb7aa08f7 *R/auxi_ROC_PR.R
0263bb9f9826199a2777513bfc42e2f0 *R/auxi_databaseFormat.R
257bd9ba65fc371e0702749e197eb3cf *R/auxi_fgsea.R
a2983c8702f25d0bfa63660b751fcba5 *R/auxi_figureAttr4.R
0fc501645f407f3ba3b46910c667e53f *R/auxi_gsAnnotatedDF.R
72ba7abb62333ab56bf99d5c17509001 *R/auxi_plotly.R
cec9da8f7c0c922fc5b100b7bd489b67 *R/auxi_ptmotif.R
699e2eb912aabfb8d644b36859f96d89 *R/auxi_queryStringdb.R
d5f3bb15662baeeb1df3ed678f813da6 *R/auxi_shiny_misc.R
1693fa320384a542d0a750a37738dfe6 *R/auxi_sparse_converter.R
d19beb805bb99b1b3a3abdc80d6a80ca *R/auxi_stats.R
e019ad6d97ae8b7390a2dcb94ded973f *R/auxi_vectORA.R
470fb14677707cdfaafa70a0ce3194ae *R/heatmapshinyApp.R
8e3cfcd9b442ea9ef3f649d5a07ddeeb *R/heatmapshiny_auxi.R
0c217b538e8889cf07435f1d102f756f *R/module_PTMotif.R
936b08edd89473cb7931557d9ebdf70e *R/module_barplotGsea.R
53a93b62c1b134535be897e1de928eb3 *R/module_boxplot.R
7c91e1d7831b305b2e6565a8a72d71ed *R/module_contTableStats.R
b378da3a19300df7fdda581744264533 *R/module_dataTable.R
63eab78753fd710a71b259b21c95f218 *R/module_dataTableDownload.R
f91cfe01de034ab7806e9c70ca9af007 *R/module_doseResponse.R
ecc6b1c970e4519578a91af23d30c38e *R/module_feature_general.R
8d47e700aa093db8afbc6bd57d393642 *R/module_fgsea.R
edc9f937b2e3ac5ab3b74cda7408fa9b *R/module_figureAttr4.R
d41057b8d5b0cc90a2b1c3cbadadfba0 *R/module_geneshot.R
199d2ea9c2852c8da088000bfcdc903e *R/module_gsList.R
cee3620f649806e17756ed49f505ca59 *R/module_meta_scatter.R
d2581583d8158b5b2a24989faf7fb75b *R/module_ora.R
ba5452eb1cebb1ca934eaa8ab87c6f7c *R/module_roc_pr.R
6d34c3a5433ad8bd0d118f1bde65a29b *R/module_sample_general.R
7a1e358db0613b9d745d75de7f10fe8e *R/module_scatter.R
6e7187d3ee606b4f8dd2d98c2f931a7b *R/module_string.R
c89e352094eed2ab05f748f0ac85d493 *R/module_survival.R
276e3c1625a2aaa61c7866eda97497be *R/module_triselector.R
ce19b5aa24b46ac4e7ed84a6a318d9b7 *R/proc_doseCurve.R
ff5ee794872297a39d7abbe534feb0ba *R/proc_funs.R
1cb01905612b4188018a7695d093bb4f *R/proc_parseDat.R
55ee29118c251647f68feab86245759a *README.md
208211981ce7579a347227e55654e89e *build/vignette.rds
2c716eebfb8ee7a61a27036884da036e *index.html
6e7612ab0c2dd0122ef547aabf622754 *inst/doc/quickStart.R
ed4522061962352f98f8920eead44ef0 *inst/doc/quickStart.html
c59da537e4d60fc468092dade06fc3fd *inst/doc/quickStart.rmd
c0ecced6cd5cdb4e7e5d491d7f6a4e75 *inst/extdata/Dockerfile
b4375c45fec81a6d04eefc87d98766e6 *inst/extdata/app/server.R
c63db1038dacaed4e80b9acc1d1b17f9 *inst/extdata/app/ui.R
a96b066b62bfd495f36d01b3e311d189 *inst/extdata/demo.RDS
fd394db5423d2e32331375ca537c5cae *inst/extdata/expressionMatrix.tsv
ca034d14039e05b92eace7c897e7bf7f *inst/extdata/featureGeneral.tsv
e9d9882a35b132fae4ab3a05738d6e2c *inst/extdata/geneset.gmt
e3e85ec88fc51a985e963be92209c7d7 *inst/extdata/install_shiny_server.sh
89bb328e78e57a04ef3c215f9811c5ee *inst/extdata/sampleDrug.tsv
1c88264377760da3057d492a88413a77 *inst/extdata/sampleGeneral.tsv
a5813dd6921df01afc223186ac32d4f9 *inst/extdata/sampleSurv.tsv
95f3696933d12001aed38bdf1c2d0cac *inst/script/make-metadata.R
5b0d066e4066562edb8e2897987221d5 *man/app_module.Rd
07057c54c9ef112df16a6edf99ff89c6 *man/app_ui.Rd
b9948c2c0cc05ba6f211ff62714b9ecf *man/asEsetWithAttr.Rd
c34611057760c77f1af1fb56db1cd27f *man/correlationAnalysis.Rd
bb03fb7748eb492ef5e6d8baa9ea582b *man/csc2list.Rd
722035fa747ea6d5fde582aace925962 *man/dot-e2EC50.Rd
8e5750fd7688957ac5b906a4b0c88f5e *man/dot-modelFormula.Rd
54d71e19376f8650fe367b94ad19275a *man/downloadUPRefProteome.Rd
793842961ef1af58290e7821fda2f684 *man/draw_roc_pr.Rd
04fe17018108b7dbb5e992e15cc32939 *man/drmMat.Rd
c5d6ce78ad86d49516eb8b05fb0368b7 *man/exprspca.Rd
47a8a929e0cf7137d2656ac53e06985a *man/extendMetaData.Rd
b9dc1022689e1293de69735637996057 *man/extractParamDC.Rd
2a33a11e68333a0ae3f2874880646e5d *man/extractParamDCList.Rd
1da9e6a0f997771f04611227d8fc8d9d *man/fgsea1.Rd
205b4784e12df07459979f6ef6e95186 *man/fillNA.Rd
d76fea7c6fcaf4654ed6449361ced2df *man/filterRow.Rd
0cb60fdb09744daac476544602eb786e *man/getAutoRIF.Rd
3a4eb130f32fec3044611ff73ab4e02b *man/getMQParams.Rd
4e73cf1bbf0c2d14afed66d89b7a53ca *man/gsAnnotIdList.Rd
782e6ba27a02b1053a296b5519acfcb8 *man/hasAttr.Rd
1032be23915fe4cdf3292e7d9849d229 *man/hclust2str.Rd
8b51b84fbf7b6e3fa8987ba5a833fed5 *man/jaccardList.Rd
a3ec8acae5a1b4dd6cf3e4c3f58b8143 *man/list2csc.Rd
8cbbcb7b2725787c1eccc9b7ee3f63a2 *man/multi.t.test.Rd
378148ea8f2ba87f58adce543d565a01 *man/nColors.Rd
743a21925f28cd4ed1b80eccab8d091d *man/normalize.nQuantiles.Rd
199741a98936d17b68866bd40970f262 *man/normalize.totsum.Rd
e1b05baad12528c032141f20185b95e9 *man/normalizeColWise.Rd
a581ebbeafb2b5180e893447f380aa57 *man/normalizeData.Rd
0129ea08558699d00aac0449d1ffba2e *man/omicsViewer.Rd
162d1bff5ea27704c5ee412871c02680 *man/parseDatTerm.Rd
9a96315cbcdda238815410ae3396b680 *man/plotDC.Rd
db97f95e6ed526ba0ae8b5be6581b07c *man/plotDCMat.Rd
6805c55c80d90bf12a42845b078703ec *man/plot_roc_pr_module.Rd
2174f57d9df6b8e2eebd639632a75d36 *man/plotly_boxplot_module.Rd
29ac2fb2bc761d8170bf9d13d47c4a00 *man/plotly_boxplot_ui.Rd
2a07f59d86a6c01be85727ec37ce0681 *man/plotly_scatter_module.Rd
6093d749db8f283071ce1c0df87b7ea5 *man/plotly_scatter_ui.Rd
9a1e37c8bc4c901af6a806e029117f79 *man/prepOmicsViewer.Rd
412d44dc33b803a52d7e733e8763d267 *man/read.proteinGroups.Rd
ec945cd194d5993843a96c275f2670c3 *man/read.proteinGroups.lf.Rd
fa3bde42a727b4ca8cbca1bd6c47d6d3 *man/readESVObj.Rd
7da42029429dd9904df2b6b588660495 *man/read_gmt.Rd
a2cdc4bbb84e2a65f7acabd2b6f1228a *man/removeVarQC.Rd
0da97abaa5cb46fcf382361f462fb5e0 *man/rowshift.Rd
ffacacb357b1dcedb90e8651f452fc6b *man/saveOmicsViewerDb.Rd
cb932f15a2aaf44cc31fcf77d19cc086 *man/triselector_module.Rd
043773fe2efb34646b19f1f3ea7c8adf *man/triselector_ui.Rd
61722d92a8789e045e53633052c278cd *man/trisetter.Rd
fa9bd3875b32d23e9d82c9ed4ace79ce *man/validMQFolder.Rd
25abc13d1481afd37b4fdbf8aa446e3e *man/varSelector.Rd
dc1670052841655cc524da47a70a282e *tests/test_auxi_sparse_converter.R
87cd1a75a75ed804db54b8715a17807f *tests/test_db_vs_esv.R
bc75293f9bf86b321098e78535541420 *tests/test_dose_response.R
e3cc85c9668ffb657f76bf92e5e3221a *tests/test_motif.R
0ef65b7d891f9af80cac5b49b9750c56 *tests/test_ora.R
5f47d59800d7b2350bb251c46e69736f *tests/test_shinyAuxi.R
5690a272327d80dae5026d39045f1738 *tests/test_stats.R
c59da537e4d60fc468092dade06fc3fd *vignettes/quickStart.rmd
