10a36181e4c899521abe80defa0d08bd *DESCRIPTION
c630060ac34dcfc7393b06304b282ed1 *NAMESPACE
15e4239ce428b50dbe134a685c6d8673 *R/AllGenerics.R
8de4fda04ce276a7a81a720ec3e2d7a0 *R/Methods.R
0cd5c7d3880b258bd829956a0f235c10 *R/MethyLumiM-class.R
599765f87507019c7fe5c1c36d2026ff *R/MethyLumiSet-class.R
28efa65d3bb1140fe939bb783d36703d *R/MoreGenerics.R
7b54169a26e051b2a26f704f11e1c860 *R/bgcorr.R
da6a5c125927644536be925557217926 *R/coercions.R
648570b91ee60afe7588872eabe4037b *R/detectionpval.R
21bb6a469be9f697558496b4168e638d *R/featureFilter.R
05273734a3dea5220fc3dfd0cff300f0 *R/mclapply_replace.R
cdaaa445a498b0d9078c68b5fcc0f3f9 *R/methylData-class.R
f0c4cab3de01aab6ca251cecbb9dce56 *R/methylumIDAT.R
cf75c9ddc3141f82ee2c956bcc35139c *R/methylumiCSV.R
b6b4db39821a6016413e7d8b2d913c9f *R/methylumiR.R
abe17d13f47791c1047180e4a4ffa03e *R/normalization.R
141aabf49b98d99312f732f64a6a4a75 *R/plotNegOob.R
d6f7e2719554968a6a23c4232c1e87fa *R/qc.probe.plot.R
392082d23bee87a42246d7b56406f8ef *R/readIDAT2.R
c611fb5b708610619bb51afd9c8c1fdc *R/stripMethyLumiSet.R
2a1819629c17acbb96250eec7bd276b0 *R/utilities.R
297a8eb087ad9e8a0ceeeb31076e648c *R/varFilter.R
79b6b31fd302af7bd69d9460b52632ce *README
79b6b31fd302af7bd69d9460b52632ce *README.md
e53f4f7be0c7fafc40d2eb9a41bcab88 *build/vignette.rds
e2342dc5574577b9ab070836ec8c8097 *data/CpGs.rda
256ea6e9f49b7118f56cb051c052f857 *data/datalist
4e43b8c1213938a9bff2ba13e2db5b65 *data/mldat.rda
605acd33c56d116981420785c5d63607 *inst/NEWS.methylumIDAT
93d21b8487e6ae249834d8b759d411e8 *inst/doc/methylumi.R
3bb7a8ab93cdcf14277c020cd73105f6 *inst/doc/methylumi.Rnw
585d1a936c001b9dbfe33186244d1798 *inst/doc/methylumi.pdf
02837a7c42853b27f37ad19ea2ee0372 *inst/doc/methylumi450k.R
432696075d2d80231dc4e8f80ce67d8a *inst/doc/methylumi450k.Rnw
09e696834a971eeb0bc99e6d5dc24ef9 *inst/doc/methylumi450k.pdf
800a163019c69395bf5f53c39d1e372f *inst/extdata/5318317007_A_Grn.idat
b053ee83b6b53b979510056525195c5d *inst/extdata/5318317007_A_Red.idat
d7653e4ba94d91934c056b0952d85078 *inst/extdata/5318317007_B_Grn.idat
7b93007d69d2815fd76dcb939476321a *inst/extdata/5318317007_B_Red.idat
3e0fd1b09ee3bb4c4d7a2640bf404fb7 *inst/extdata/5318317007_C_Grn.idat
cbde378c2612fd4326038e53ab360300 *inst/extdata/5318317007_C_Red.idat
68fd6ecb62288f650aacb6068f0edab6 *inst/extdata/exampledata.controls.txt
c1f7dfd0c77d07d49e88be874eff863c *inst/extdata/exampledata.samples.txt
a694c988f6429da6b165615783ba038d *inst/extdata/samples.txt
9a616c2e54f32fd5e57fbf9c02d81cee *inst/extdata/substitutions.txt
85b5c162f51a1351aa1cc80d6f3507d4 *man/CpGs.Rd
4066c40af1e9c4421fb8edffaa48430d *man/IDATsToMatrices.Rd
dca221c9c0be7738a65413610ea3dcfa *man/IDATtoMatrix.Rd
3a50650d32b872cdd542fe8a0860ddcd *man/MethyLumi-class.Rd
f6ee6be3539174a86ecdd632a3dec5e3 *man/MethyLumiM-class.Rd
8228fe7e244c36da2fcdddd6d086fd06 *man/MethyLumiQC-class.Rd
98e10358fc85c8ac639220cd7abb50ea *man/MethyLumiSet-class.Rd
931ba8000c0eedc170c2aa74b7419064 *man/estimateM.Rd
9c314ca6ac599547f1f6bf248d359e03 *man/extractBarcodeAndPosition.Rd
bb21c3d92392277c6e045cd2c8155728 *man/featureFilter.Rd
2f435fd89749fd57d8e54d8ff2699bdc *man/generics.Rd
ed53275299fb8c12e2b0db9bda8c4df4 *man/getAssayDataNameSubstitutions.Rd
4eae028481d7be1cdd652bca7f9278fc *man/methylData-class.Rd
cc5fde717440af67677815578abec06b *man/methylumIDAT.Rd
a94229979d7722cf4725587e8bf3135b *man/methylumi-package.Rd
49f1d633698c35a988092b1f28cf4cf4 *man/methylumiGenerics.Rd
e390e2802f2478b289a494afd5e0501e *man/methylumiR.Rd
10157cacea912f24cdd67bff63161c75 *man/mldat.Rd
a342c2a8c85bbe47a720bab08687ba3a *man/normalizeMethyLumiSet.Rd
774b7f46c77bea83a3b976d27148aaf0 *man/plotSampleIntensities.Rd
025381c7be312d9209fe27e90d806226 *man/qcplot.Rd
020d3c9153dbb40f9ade92f3a112d516 *man/stripBeadExtras.Rd
08cae0b8b1a9363365f62755ec8b7a47 *man/tcgaPipeline.Rd
e37d73a5ae3b132a13e2057d38d35b42 *man/varFilter.Rd
3bb7a8ab93cdcf14277c020cd73105f6 *vignettes/methylumi.Rnw
432696075d2d80231dc4e8f80ce67d8a *vignettes/methylumi450k.Rnw
