9f3680aefa6c8c189563cbd239f05898 *DESCRIPTION
94997166819eb65a0248ac2672326654 *NAMESPACE
c8c8ff26169b8381e4692425f25785bb *R/AllClasses.R
0d9f2fec5a6c2d8d6976174752b6d3a7 *R/AllGenerics.R
90acedc97fa585f2dfe908c0c696dd39 *R/datasets.R
d906749a0f174cd71173cd096c3095d1 *R/estimatecc.R
d48495d5dbfc2ccd4e954dab523bd870 *R/find_dmrs.R
10c6b06cb67ec14bccbf88e22e76378a *R/helper_functions.R
8af19a78dc02b36cb6197f2597eb484f *R/methods.R
842168313b96cacec9fba2bc25160e6f *README.md
00a3f890463e52027cfc06e604c702e8 *build/vignette.rds
13e8433e0d2bca8b5b07b81717ba178b *data/FlowSorted.Blood.450k.sub.RData
39a3edd5addf802241dc01d2962dd2b0 *data/datalist
151c8d9967e457470f82f207b547a4a4 *data/offMethRegions.RData
9224ca47f80da2874c3fb4c1ba7d9e03 *data/onMethRegions.RData
b57a7bba6c3d128f24c76978e73fe77d *inst/CITATION
660b30bf9a8fe387c7f3cbd38e40079f *inst/NEWS
0559c06727e2c43a34820b6a83ad8ca1 *inst/doc/methylCC.R
1e1c1e0b3b91d3ac8bab527be09c9646 *inst/doc/methylCC.Rmd
75f93973bfedc04fb7708048070067a4 *inst/doc/methylCC.html
ac8d5eb2ad97a52fbfb076598bc425eb *inst/objectCreation.R
5d0634311d7ab3c2cdf5d1bd48c54ed7 *man/FlowSorted.Blood.450k.sub.Rd
040945ddd02eca21dbbc6b2117d792b5 *man/cell_counts.Rd
618ea0d73c23d16abcf1ad5389c22e9d *man/dot-WFun.Rd
2c3b0c888ba4541a03777d99815fd7e8 *man/dot-extract_raw_data.Rd
281904fb9383856b892adab1f6514152 *man/dot-find_dmrs.Rd
0c7c40a809e612dd8d4d5f0c27a56fc6 *man/dot-initializeMLEs.Rd
28e3f97ddf50f7c4bdde79306b4708a3 *man/dot-initialize_theta.Rd
59aac56b0e6a3594cf83c285c47f2ed3 *man/dot-methylcc_engine.Rd
ebc20fd097e234952df1876562db6c9d *man/dot-methylcc_estep.Rd
54248736a2681171f2328dd85244c5ea *man/dot-methylcc_mstep.Rd
d2205ff7fef81638973394c913dc13f6 *man/dot-pick_target_positions.Rd
c62332524d8fb63b79ece1e00aeec8e4 *man/dot-preprocess_estimatecc.Rd
634450bef67ae9141ed6069eb51fad4e *man/dot-splitit.Rd
45ba183c4417b22f891bb9c1e827d457 *man/estimatecc-class.Rd
00347fdf0a9ff69f6963abba13de5627 *man/estimatecc.Rd
1f1c4084cbfa393e8f8197ef289bce1c *man/offMethRegions.Rd
c9e9bd561c93e9539e235d0e1b14328e *man/onMethRegions.Rd
558460021cb655c8db251f4027f4c7c4 *tests/testthat.R
9a83bfb19e9eb6ee14a912486264f2ed *tests/testthat/test-estimatecc.R
1e1c1e0b3b91d3ac8bab527be09c9646 *vignettes/methylCC.Rmd
