Package: gep2pep
Type: Package
Title: Creation and Analysis of Pathway Expression Profiles (PEPs)
Version: 1.32.0
Date: 2019-03-30
Author: Francesco Napolitano <franapoli@gmail.com>
Maintainer: Francesco Napolitano <franapoli@gmail.com>
Description: Pathway Expression Profiles (PEPs) are based on the
    expression of pathways (defined as sets of genes) as opposed to
    individual genes. This package converts gene expression profiles
    to PEPs and performs enrichment analysis of both pathways and
    experimental conditions, such as "drug set enrichment analysis"
    and "gene2drug" drug discovery analysis respectively.
License: GPL-3
Imports: repo (>= 2.1.1), foreach, stats, utils, GSEABase, methods,
        Biobase, XML, rhdf5, digest, iterators
Suggests: WriteXLS, testthat, knitr, rmarkdown
RoxygenNote: 6.1.0
VignetteBuilder: knitr
biocViews: GeneExpression, DifferentialExpression, GeneSetEnrichment,
        DimensionReduction, Pathways, GO
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/gep2pep
git_branch: RELEASE_3_23
git_last_commit: 7c8cba5
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-08-05
NeedsCompilation: no
Packaged: 2026-08-05 21:59:56 UTC; biocbuild
