# Generated by roxygen2: do not edit by hand

export(CategorizedCollection)
export(CondSEA)
export(PathSEA)
export(addSingleGeneSets)
export(as.CategorizedCollection)
export(buildPEPs)
export(checkRepository)
export(clearCache)
export(createMergedRepository)
export(createRepository)
export(exportSEA)
export(gene2pathways)
export(getCollections)
export(getDetails)
export(getResults)
export(importFromRawMode)
export(importMSigDB.xml)
export(loadCollection)
export(loadESmatrix)
export(loadPVmatrix)
export(loadSampleGEP)
export(loadSamplePWS)
export(makeCollectionIDs)
export(openRepository)
export(setId2setName)
exportClasses(CategorizedCollection)
import(GSEABase)
import(repo)
import(rhdf5)
importFrom(Biobase,mkScalar)
importFrom(XML,xmlAttrs)
importFrom(XML,xmlTreeParse)
importFrom(digest,digest)
importFrom(foreach,"%do%")
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(iterators,iter)
importFrom(methods,is)
importFrom(methods,new)
importFrom(stats,ks.test)
importFrom(stats,pchisq)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
