dd1857f45319212a25067f9aa439ec07 *DESCRIPTION
94c8b2cb1957f9b305b1f1a6ae9ab9ed *LICENSE
62c4ab6b372db4e06904847ac0413834 *NAMESPACE
b6a7dbdac5cc044dc06c2f9805842391 *NEWS.md
4b6124ce133c4af0a9cde8b971ab4a5c *R/AllClasses.R
7e3b599f35104aeaf5a996ad33de986f *R/RcppExports.R
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06f7c1876e0cdb8120e0f9717a04bd88 *R/calculateActivity.R
8e531a8213f99b26448a3452ce9f5a7d *R/calculateP2G.R
f607fe10c5ccd0873177a6bd0763fc94 *R/cellAggregation.R
a8e505957fda92ef26b27359fe3cca2d *R/constructRegulon.R
cb52783688db9c339af1ef6570956968 *R/epiregulon-package.R
9c1874b0426399de3288d4a3856037d3 *R/motif.R
8a837266e71c111965636ce0c25b69d2 *R/regulonPruning.R
d41d8cd98f00b204e9800998ecf8427e *R/rename_files.R
857777eb1b53e20babae98d2808d880d *R/utils.R
6d16540f24d932dd51314ddff3597498 *R/validation.R
339786daa59bf7a7c3cf4d9eb07085f4 *README.md
559a439ba967c8846f42d9de36a265c2 *build/vignette.rds
bd94b7c733ccd36e9e4e8af39e1ebc19 *inst/CITATION
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0f0ec77c2e1da3356c00a4ed31b4b22b *inst/doc/multiome.mae.Rmd
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b6151c1e9a36f891810149546d9c38d4 *man/addLogFC.Rd
d985ec22484abb13a67823ebbf6b2c29 *man/addMotifScore.Rd
d73a7ce00fd89e55076877c23c2992a4 *man/addTFMotifInfo.Rd
81b4f680247a77aad1d6f919601d9b6d *man/addWeights.Rd
197a36b08ce5cbad347ad905c2a965ab *man/aggregateAcrossCellsFast.Rd
353db2e99e18b399d4b797fc8c0973a0 *man/calculateActivity.Rd
4f39b68262c36c17aa3834af8a1e1520 *man/calculateP2G.Rd
67deb9f0e6e6689a4dc3b81c8fc65c0f *man/epiregulon-package.Rd
eff8e9a3dc4dd84eac9b45e28e7ceb3c *man/getRegulon.Rd
ca687955bb22965a4c065fb425b1a41f *man/getTFMotifInfo.Rd
495008b9feaeeee74391d7e2af37ccfa *man/optimizeMetacellNumber.Rd
26d7cb34cc5f2a3dd3dd4c439ee7c005 *man/pruneRegulon.Rd
79496360a88f123abc5bf8376bbc2f8b *src/RcppExports.cpp
3ecda6e87bcd63657843743a5bb31854 *src/binom.c
177c62be67393aaa9e47fdcf68d6fb9b *src/fast_chisq.cpp
5428bc80fd9c0ac260b42b97a6194733 *src/fast_wilcox.cpp
4f984e55b37c6e6ce716250462dc0b7f *tests/testthat.R
28a3909d8510bb987dc49cdde56c4c40 *tests/testthat/test-addLogFC.R
3fe3a4e7f54a15083200a6508f2f6d89 *tests/testthat/test-addWeights.R
83897aa4ab2ee90979772a05038b62db *tests/testthat/test-aggregateCells.R
b589ec2d75a2e758bea093b060b1b40a *tests/testthat/test-calculateActivity.R
c5a104d65ac3c70c81959a272120cfe4 *tests/testthat/test-calculateP2G.R
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e2313ab60a9f112fbbdcb521f5fdf9b6 *tests/testthat/test-regulonPruning.R
145e4b2e967cae3f201be31bb7e3e64c *tests/testthat/test-utils.R
015a9d3f69cc9334ccb3e56b51155820 *tests/testthat/test-validation.R
0f0ec77c2e1da3356c00a4ed31b4b22b *vignettes/multiome.mae.Rmd
