.. _available_modules:

Available Modules
=================

data (data.R)
-------------

	Sample data sets of varying types. These include:

	* a collection of gene sets, as used in the `Lamb 2006 CMap paper <https://www.ncbi.nlm.nih.gov/pubmed/17008526>`_
	* An example metadata table, as one might find in a .gct or .gctx file
	* An example GCT object, with row and column metadata and a matrix of expression values. 

	Maintainer: Ted Natoli, tnatoli@broadinstitute.org


io (io.R)
---------

	A collection of GCT class and methods definitions. 

	Maintainer: Ted Natoli, tnatoli@broadinstitute.org



utils (utils.R)
---------------

	A collection of utility methods for GCT class objects. 

	Maintainer: Ted Natoli, tnatoli@broadinstitute.org