986d8b0fe13bd0fc72cd7a48a2b5b81e *DESCRIPTION
480dc2f5a35b92a0467c61a9755f2376 *NAMESPACE
0b868572ae9afbb9c360b2ca3eaf1855 *R/aCGH.R
bc81ada9e9254e0874a6f7065d31470f *R/aCGH.plotting.R
d1f566c0a968a8d2f7b8989236797428 *R/aCGH.read.R
578cd36257b08e2988b1e6ec0e9efae7 *R/aCGH.test.R
025ffffe449482e110f84ef93f7d59bf *R/clusterGenome.R
534d078431797b0e3c6d1f160ce1b782 *R/funcs.dataplot.R
63fe4ba33e659ac6b1fb49c8c301d1be *R/heatmap.R
a59bcfa588af02053b78f2d7ad59199b *R/hmm.R
319859ca2b92d7b81798ee1207147577 *R/human.chrom.info.Jul03.R
249aa3cda724c473ab5fbe29e77d8eef *R/human.chrom.info.May04.R
76e34cbb9e2799d315917ce0ec06ec64 *R/mergeLevels.R
d5804fbb00d30238e0daba05de8d6bc3 *build/vignette.rds
49377c912a6aa4c4bdd9fa156c2de6e0 *data/colorectal.rda
a129256e07d26586ff66ad5a611cbf49 *data/datalist
cd184f75e571eae6353116f4e384c91f *demo/00Index
7a4aa6cbc001536c1332bc840e1f720e *demo/aCGH.R
94628d67128cb3f0f5823a4f13d43d57 *inst/doc/aCGH.R
4d32a1bb32b73bb22dfcf705b021fd1d *inst/doc/aCGH.Rnw
244b8ff208a604f69fd784366c4fb652 *inst/doc/aCGH.pdf
e8764b80d6098d1767b9c3c885cc4eec *inst/examples/clones.info.ex.txt
0da398d31f48022bc79afe13377f20c4 *inst/examples/human.clones.info.Jul03.txt
2ff7850bacaa7670c201ec422498d39c *inst/examples/log2.ratios.ex.txt
436d62260a25aae853cab5bcfaca0bc6 *inst/examples/pheno.type.ex.txt
db742b85a2520c458bd3a5881b8d8338 *inst/examples/sprocCR40.txt
a2a2ed7e08ccfcfb6adcd8ff2723ec33 *inst/examples/sprocCR43.txt
d4fa0a7b6ff3ed4288008593a8bf5bee *man/aCGH.Rd
d94b96369a391e9482617c8368a39d49 *man/aCGH.process.Rd
8f3c4e1bf40e1f9cc16204b8d57016b4 *man/aCGH.read.Sprocs.Rd
df3de4bf30aa3ddf447361fbeff5d066 *man/aCGH.test.Rd
7fd350339818f1a63899d94153541672 *man/clusterGenome.Rd
d68a043f93770f9ea6d1ae124683543c *man/colorectal.Rd
b137cd4438299c071763288ce40c1cc2 *man/computeSD.func.Rd
4d1386b3b8f21a61dcb42cd4e48772ac *man/fga.func.Rd
1303c977f81f64e108c7f7e868d8db07 *man/find.genomic.events.Rd
8f55e5a1854f16708b43608dc8f55580 *man/find.hmm.states.Rd
2b6ce3010a94fb65f6869f87b21a973e *man/findAber.func.Rd
843181591ce06c4dbd4e0c7b761388c1 *man/findAmplif.func.Rd
1d3ae3a32ef406f105d4e73c5e2f48ad *man/findOutliers.func.Rd
4ba55b8c0ae3e0bf767fdc576633f280 *man/findTrans.func.Rd
885c6fd9da4d19200ecbdffd7e219237 *man/gainLoss.Rd
84039727f5f1e7b5457ff0070cdb1b7d *man/heatmap.Rd
4c332248e330ef9d69bfa755f7911b08 *man/human.chrom.info.Jul03.Rd
7b980a04c782a400883895d053d89c00 *man/human.chrom.info.May04.Rd
6f84f251f123787178757c862a8492c5 *man/impute.HMM.Rd
bf4b0e24df0f8f25cac7cf7d7aad8770 *man/impute.lowess.Rd
40c9c25aa205699b304c95970ea900f3 *man/mergeFunc.Rd
cb906b611d048e7183612b38b73fefb0 *man/mergeLevels.Rd
37f77eb453fbe6210f53ffc8ec895717 *man/plotFreqStat.Rd
3361ecdd33babfa37666802e9b9d1c73 *man/plotGenome.Rd
a01810d7c348e9e595e31af44baaf852 *man/plotHmmStates.Rd
9ab86a5de30a38d5fe8db4b07a0015c3 *man/plotSummaryProfile.Rd
1b6393482a12625b2377a246a025cecb *man/states.hmm.func.Rd
dc67298011f1953433c5c1045a20ea3f *man/summarize.clones.Rd
9d6282d6ec52872ea84b0122255945d3 *man/threshold.func.Rd
36ff1fd6c28552d9a03fb19581f1e4fc *src/Makevars
9cb8e7eb214a83aad949cebc99d7ffc2 *src/hmm.cpp
4d32a1bb32b73bb22dfcf705b021fd1d *vignettes/aCGH.Rnw
76735aeb2e920a233451d3c23b413dcc *vignettes/aCGH.bib
