4242823dcb1097c15a2a49ccc17809a2 *DESCRIPTION
e15c61ed45e40c21835156e77ab1d5d1 *LICENSE
3b6b8dda5fee8f892e24d026a7df6af1 *NAMESPACE
866740f845dfd2016b56d73aaf451558 *NEWS
f196b0a2620844d553a85ad62b266f82 *R/TAPseq.R
81e618d46e7cd7e81528339824b54368 *R/TsIO_classes.R
fa4bc7d7081b6ba790a65e9078bb1a88 *R/blast_primers.R
73abbb49727702cadc4899361fd56ad0 *R/check_primers.R
5938096ec43b9e66da3c80f9a47c7ff4 *R/data.R
e7396c7701e29490d2a62ac2070fa27c *R/export_primers.R
ab3ecbe6c7eac42db3c939e9bef1f036 *R/get_txs_seq.R
685ec6f3e02d959801b4b23367a0b377 *R/onLoad.R
a4da71105832e24b3a7f7f75ed63e82a *R/pick_primers.R
47c017b2506bb463bf6e1be3631ac385 *R/polyA_from_dropseq.R
028dc660df92ee6ff018fe0ef13b9eab *R/primer3_io.R
9b2e9cf9b891c454495c902387cf5716 *R/select_target_genes.R
f7db8651e611064aef4d8ffa79de8cbd *R/sysdata.rda
77f58bfc6129c4e6c8dbd5b9ae3e4c83 *R/tapseq_input.R
dff60f0b450bbdbc61c0d568dc8f892f *R/transcript_model_utils.R
bc52cd121499f24c2eb1b51c4d692f20 *R/truncate_txs_polyA_sites.R
d1d8a0c0540929977b118b5392b40500 *README.md
8e297d93da8f71eb6b231e0d8991e6fd *build/vignette.rds
7147f86a4c671889c6ef0cc107900418 *data/bone_marrow_genex.rda
59dc46b697af22faa869da127074eb20 *data/chr11_genes.rda
530aeadf329f37679807514b4751abf5 *data/chr11_polyA_sites.rda
cbd510325a9d10dee506e51354cd30a4 *data/chr11_primers.rda
2d610b6fc4d383d50a314e1871610c78 *data/chr11_truncated_txs.rda
7fc8a0a9da1ebd2b4a30bc66d9b331b9 *data/chr11_truncated_txs_seq.rda
5d2ba078bea6ba7c2783929b74313e65 *data/datalist
0232fa8bebbf60f5107576003a623177 *inst/CITATION
fb1b5a8eb4ead1cc3c7f0912869e3130 *inst/doc/tapseq_primer_design.R
36117b240a522840ac9cfe4094f223de *inst/doc/tapseq_primer_design.Rmd
bfb5c5fcd1a83005879471340a8503d5 *inst/doc/tapseq_primer_design.html
25659bca05b36ccfdc3fc533bcb78f30 *inst/doc/tapseq_target_genes.R
202bc0a25dcaf1192a07d6a1eaae0952 *inst/doc/tapseq_target_genes.Rmd
6e135808a3ccee2f4884f29c6eb34574 *inst/doc/tapseq_target_genes.html
52843df98be264c32f3314ae6da20a10 *inst/extdata/chr11_k562_dropseq.bam
121bf60ae47df94cf501563fcb8ee749 *inst/extdata/chr11_k562_dropseq.bam.bai
a358918f648b4c587ca20d3bf0ab0c5c *man/TAPseq.Rd
7916c7e42aecbc87579a727b53cbb70f *man/TAPseqInput.Rd
2e57cb18b3ca81de7964333e7ddef66e *man/TsIO-class.Rd
999f13ba583a196453c99414b2e4c8d3 *man/TsIOList-class.Rd
0041c880101d30eb4ca4e1ef6aa6ae72 *man/accessors.Rd
7250bd2a0f4959fb93850ac0aa070b3f *man/bone_marrow_genex.Rd
ccb1c10d02fcaeed096ed9765c1b2706 *man/checkPrimers.Rd
f4c9ca07b9c0efc4cc62fe50374ecb1e *man/check_tool_installation.Rd
69560f4aa5affe0b3a154bbf4caeff2d *man/chr11_genes.Rd
9d2b065de64ab96ed6229002efe3728b *man/chr11_polyA_sites.Rd
e83a285bbcd501c8426059619cd6c4a5 *man/chr11_primers.Rd
2a2deb8bcdb1ddab6d22aeb68850677f *man/chr11_truncated_txs.Rd
d47362f0596ccc64540d9193c53b4eff *man/chr11_truncated_txs_seq.Rd
d8c09d21662b01af06ace543c08153a9 *man/createIORecord.Rd
466a79bec23688a136fffe5637fcfdb5 *man/designPrimers.Rd
b67665017f6d46a2a50c7b3408d1ad60 *man/estimateOffTargets.Rd
1777676453e9deca6eda8ce5a79a34bd *man/exportPrimers.Rd
0df9871e1ca7f8251f6a3f90e7985b83 *man/getTxsSeq.Rd
7d13f7ab6190c2ffe4f8a1d1540d6e79 *man/get_gt_sequences.Rd
de15b668c6f637537c2ffde779609596 *man/inferPolyASites.Rd
12e89fdf64ec66dbaa6a6631bb1510eb *man/parsePrimer3Output.Rd
c7ffb506242dc052605d81fc66941d0e *man/pickPrimers.Rd
63ebead1cd66ef9f6a42d94cc5975d75 *man/selectTargetGenes.Rd
8afcbbc2e4862e5f4049e5b7753b90f7 *man/truncateTxsPolyA.Rd
e2edcabca05ddb2962e12c9a209b4a8c *tests/testthat.R
515f5659469638828b40681d8e26ce9a *tests/testthat/test_TsIO_classes.R
30ab053f27172ee984df077e64a87289 *tests/testthat/test_blast_primers.R
8b65741abf33507d3d28427bc319c5e7 *tests/testthat/test_check_primers.R
62819a4141ac89ce8742fc887076f9b0 *tests/testthat/test_export_primers.R
ef87b5d263aedb7ab365f29834c2f829 *tests/testthat/test_get_txs_seq.R
29b692f37dfaf834dd25a25219ed0687 *tests/testthat/test_polyA_from_dropseq.R
a05a35e8da18c2ea49eadd904c062320 *tests/testthat/test_primer3_io.R
c146f7864d35c0691044bd940724b816 *tests/testthat/test_tapseq_input.R
44c5e0b1e399b7a4fd82f8404474ca30 *tests/testthat/test_truncate_txs_polyA_sites.R
36117b240a522840ac9cfe4094f223de *vignettes/tapseq_primer_design.Rmd
202bc0a25dcaf1192a07d6a1eaae0952 *vignettes/tapseq_target_genes.Rmd
