a56b476271bfcc8cbdf06e9333439432 *DESCRIPTION
7de5bb2d39dc5ee7bdad21e31aa7d18c *NAMESPACE
6f87d681d7e2a772fe70936d80f74377 *R/assignSeq2REsite.R
ff9f7d93c0b38ff3ec4adb4ee19e8d1c *R/binom.test.REDseq.R
5188d484b53bde5edaf0ddb61abab656 *R/buildREmap.R
67ab73cb26d2b75c8f44e651d0a575bd *R/compareREDseq.R
1c136f90d321cba8e40f0388c1c5e664 *R/distanceHistSeq2RE.R
b34013052abc31ff668e08889787dbd4 *R/plotCutDistribution.R
6351fc4c1937656d36de18633958d95b *R/searchPattern.R
e8c13432d698e2693ab953277d9756d3 *R/summarizeByRE.R
07a4c368d78025394081e6b1c9bee308 *R/summarizeBySeq.R
c364642996d6792d8cb765cd0403f567 *R/writeHits.R
a73cc10368e07ad5acb136c4b050c702 *build/vignette.rds
29ee16033d7fbdf304d56c1120a89b02 *data/example.REDseq.rda
e01944ec06d033d6b4ba3b479d946f2a *data/example.assignedREDseq.rda
f0cbc80a37924710b24d6fbcf48738ca *data/example.map.rda
32d2645233630422790688f2cf1b22c7 *inst/doc/REDseq.R
a57925b8f4b98681b4ff92b513ba4126 *inst/doc/REDseq.Rnw
bb9fb5f697320eceb5c2ccc5e200889b *inst/doc/REDseq.pdf
2f5b93a7d4298a04e7855cac2ff5f0a9 *inst/extdata/REsitesUnique.fasta
625aba1198a5833b665e033a27d75e94 *inst/extdata/TSS1kbCutFreqAndVariance_hg19.xls
bccfbef7373969711266019b5b4b96ab *inst/extdata/TSS1kbCutFreqAndVariance_mm9.xls
c1d2a54ce4a4191e42545c57577b5f49 *inst/extdata/examplePattern.fa
e87b6d2bdf06d9e86c7889bbf095add1 *man/REDseq-package.Rd
54be466eed53e8ee84c5fcc6a7179762 *man/assignSeq2REsite.Rd
49af730959fb1ee5c6a70dd063a134c7 *man/binom.test.REDseq.Rd
2afb1e4d160e1699f0912e8e30d3505b *man/buildREmap.Rd
9a600bb8f0d3ead450821203ec7e22cb *man/compareREDseq.Rd
56c678e6cbddb69f135a6bc4698fb67a *man/distanceHistSeq2RE.Rd
4f86716c75bca84f875e88f43b2693ac *man/example.REDseq.Rd
35927056f7e5fb70a6340044ec43b3c0 *man/example.assignedREDseq.Rd
2fd52c005e097dba9c8ce57712efbf88 *man/example.map.Rd
138953d4428860ea9e167e47f0b00017 *man/plotCutDistribution.Rd
3fe3ea56bb8b7f6a8144558d1c569923 *man/searchPattern.Rd
2a8c8ebcc518b7853cc84fc192a5b1cf *man/summarizeByRE.Rd
0eaadfbc3028a4b390b391d59308e011 *man/summarizeBySeq.Rd
0655079532be0bb0ac13d451970ddd25 *man/writeHits.Rd
a57925b8f4b98681b4ff92b513ba4126 *vignettes/REDseq.Rnw
