26734ccadd43c58713a6f3ad4723c9b7 *DESCRIPTION
319221f598abb0c73c76dca938aee083 *NAMESPACE
326c911522c07fe9a9ef95a56fe1f1d8 *R/autoCluster.batch.R
e21609c14c0742f0e946ef6001c6adef *R/backend_functions.R
0ccb6c283015b3b8f478f7a51a6ba86b *R/clusterStats.R
e2df12462710821e6df80e28c1614a5f *R/collectData.R
c655ac82a9c004c6cdecb784307ec788 *R/densityPlot.R
394d4fc3e2e1df12165ad492a4a46ab2 *R/fcsInfoParser.R
8e0b977324931a4a7ab792925426b7a5 *R/filterLabels.R
b6b6000a4b4d08ec93601dff4289e7d0 *R/findCutoff.R
f52b41a977ca8c1d5c30b13dac83c91f *R/flowHC.R
c72f2c6a384a61ceaf1ae2e0baf42916 *R/flowSOM.MC.R
65d96c306a3ccae96a6c8d0621cd3273 *R/glmAnalysis.R
c40b3ed24dc9af4e035e1ab954ec396d *R/labelCluster.R
2831e408f82be55ebc85eb23c3041f0a *R/labelSummary.R
68de53732dda2aac1d059189262b7061 *R/markerFinder.R
39e592b80026a92faf8e1c90e545df40 *R/metaAnalysis.R
83b5873b7cb1ecd6027372ed3c54f7c5 *R/nameUpdator.R
a64d6d8e1b1bd46a64bd851398a7b4a2 *R/panelSummary.R
3c53a2c4294d7489fbd9a8bf8d540e12 *R/plotGA.R
dc65c8f6ef2b794533f70b342eede6ed *R/preprocessing.R
5b280f9b3cc2ef230740b311cfa9abba *R/preprocessing.batch.R
5e4c8240dea5364078b922bf1f6fde5e *R/sampleInfoParser.R
1d8a2cbf642e6b398d6471ea990267ec *R/searchCluster.R
9af6d39787e63fab749d83bf730dd9a1 *R/searchCluster.batch.R
1f7ad389ab9039c2c27898ac5399b2ac *R/set2Frame.R
27674a42d434d6f191791fba6bb0f793 *README.md
5a2a7c20f29c4ae8eefc4b0c8ecaa3ec *build/vignette.rds
d1031feeaf2bc029dd66b824d1460bc1 *inst/CITATION
4861fc480196cd362a5b775085fe15af *inst/doc/MetaCyto_Vignette.R
52b43be5c7cc254a7bab25c0546bce06 *inst/doc/MetaCyto_Vignette.Rmd
1a5f664d0c4fa8abce756bc3a6cb7fa5 *inst/doc/MetaCyto_Vignette.html
e89bb1ee47b4f86fa4b416d89e038a4b *inst/extdata/SDY420/ResultFiles/CyTOF_result/11059_cells_found.573523.fcs
a6311f841a47b8f30a2e5659ab7d54f1 *inst/extdata/SDY420/ResultFiles/CyTOF_result/11445_cells_found.573686.fcs
7a805d196b90177ac42e8b683859d253 *inst/extdata/SDY420/ResultFiles/CyTOF_result/11462_cells_found.573690.fcs
f71119c8bed224d4ef2f442d1f74a539 *inst/extdata/SDY420/ResultFiles/CyTOF_result/11491-1_cells_found.573697.fcs
bff2f1efa04cf6ddad772412f558c006 *inst/extdata/SDY420/SDY420-DR19_Subject_2_CyTOF_result.txt
8d9f4e7bd55b25e2703ec34fbf2b2539 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Hs90208C20090205_00.583331.fcs
bc441b0a9f066d1da87987c78c9354df *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Hs90210C20090205_00.583065.fcs
eca93424d91beb61a25ccec31bd13137 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Hs90211C20090205_00.583066.fcs
d45a2ff6bcce581c00e8ec154c9d9c55 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Ki67ccr7_Hs60022C200906243.581846.fcs
cc63e1572e4bcee54e316ffeccc8ef9c *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Ki67ccr7_Hs60025C200907134.583112.fcs
3695bee60375ccba1429c5e503bfca12 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Ki67ccr7_Hs60041C200908104.581964.fcs
0189cc44ebfd549b6a390633255d6b00 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/Ki67ccr7_Hs60056C200909217.581912.fcs
ad9ae584bad968624dfe63862a0e2919 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/T_Hs60003C200900407A_00.581924.fcs
84dd396d1400843b8fedba78e40d5ce5 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/T_Hs60011C200900505A_00.581822.fcs
b99c771909fe8d651ee0bf0b73f04af4 *inst/extdata/SDY736/ResultFiles/Flow_cytometry_result/T_Hs60012C200900505A_00.581833.fcs
4b3f815f2e0b57431094e8a9c77649ca *inst/extdata/SDY736/SDY736-DR19_Subject_2_Flow_cytometry_result.txt
4a01f8dff5594204ca8f43955bffd991 *inst/extdata/cluster_stats_in_each_sample_1.csv
dc2027c1aa4f20eb56bb87a016808ae3 *inst/extdata/cluster_stats_in_each_sample_2.csv
7bb92aac3d8d3a0ad72fade058f6d8ef *inst/extdata/cluster_stats_in_each_sample_3.csv
065decd0687cad993956f8fc3d7ec172 *inst/extdata/density_plot.png
61cace97b3fac4e4a98c31347e540a4c *inst/extdata/fcs_info.csv
17a17cb90746c9b8992af6d0450319c7 *inst/extdata/processed_sample_summary.csv
3f6678087c5e36724d7f94d355cf11f7 *inst/extdata/sample_info.csv
d1b4195d74a5de5eea2b4352eddc4ba0 *inst/extdata/sample_info_vignette.csv
2b107fdd0ea4597a916f61687468f4fa *man/autoCluster.batch.Rd
2307a4ae6ff2154447dba6f4dd77c709 *man/clusterStats.Rd
f8008ef79b299ae11fb000628cc10087 *man/collectData.Rd
de6abdf4db93fdf859846b975c1f5578 *man/densityPlot.Rd
6916afb80b202c3a9087a52f4b9a3f5c *man/fcsInfoParser.Rd
cfa71347ca09e84c3dc5aec4ffb95478 *man/filterLabels.Rd
133df53e2613b7d807673e5531e79ea7 *man/findCutoff.Rd
a445998ef8acd90c5836c5d2417530b9 *man/flowHC.Rd
8597b49c83ec1458cfa7ae4809498e86 *man/flowSOM.MC.Rd
ba46036a68645193d034534c92ca251f *man/glmAnalysis.Rd
9aa9f49dcf038e03f1de60ed53689fb4 *man/labelCluster.Rd
d5ae4786606507861f3f9e55fc32a1a6 *man/labelSummary.Rd
877022c66fd3f9615021d7b4abaccf8e *man/markerFinder.Rd
f9e2989a3bb59661b9737d40e1f743cd *man/metaAnalysis.Rd
78a6ff60e7f2f6b8212bc3f398f68ee5 *man/nameUpdator.Rd
77d620d0f0ae223fc4c875f83c671f85 *man/panelSummary.Rd
02ea4add6bd8d018c09d2a2375329472 *man/plotGA.Rd
137ea902957048eae68c7953de8948aa *man/preprocessing.Rd
1ce411ae38c92ff73a3ebc0ce3f83911 *man/preprocessing.batch.Rd
cf3d86c1c5c42b6771665062fea9acbf *man/sampleInfoParser.Rd
77640198bbb2d1aecbb3a9769206b10a *man/searchCluster.Rd
b52900fc268a7e73373656fe352b8e30 *man/searchCluster.batch.Rd
030278f2b32d9c2d7c7f463a3dfa399f *man/set2Frame.Rd
52b43be5c7cc254a7bab25c0546bce06 *vignettes/MetaCyto_Vignette.Rmd
a18ae12a24b9eef9e53e7f6e9aea5605 *vignettes/Panel_summary.pdf
