b49e559ebd291187533de77cdc97f131 *DESCRIPTION
2ee27fbf932c5dd40032925b29bc0106 *LICENSE
6dfa6786f674f650fbba07fbe86470e0 *NAMESPACE
87ff0cb426701b952a4a6624dc7139b0 *NEWS.md
255b6b9f907caf9fff7584e93bba6550 *R/annotateProteinInfoFromIndra.R
0a0c6d34ec306815f80776ec1332a845 *R/getSubnetworkFromIndra.R
eb5c2b8f700916acc95b5525e86e5448 *R/utils_annotateProteinInfoFromIndra.R
93415414a2dd992213d179fd7570d866 *R/utils_getSubnetworkFromIndra.R
7b926330c17250120d6f68cdf92fed63 *R/utils_visualizeNetworks.R
410cc830ed7bc18bbbdac8ca1a6c34a3 *R/visualizeNetworks.R
cd6a0427a37eb2f6b22f776cb8bbf29e *R/visualizeNetworksWithHTML.R
50aeed13ddb8ae1782662cfdb95b53c2 *README.md
3ec866488a8d1f2e3b06b35c5d8bf192 *build/vignette.rds
ed05ef2213593987a26efc133b03ca1f *inst/doc/MSstatsBioNet.R
263668e462b0178ecd8bb9f205ed397d *inst/doc/MSstatsBioNet.Rmd
cbcfa0f66928984c862350a51347fb0b *inst/doc/MSstatsBioNet.html
f2c4de15a4fa5f00c52c3e542e5f1eed *inst/doc/PTM-Analysis.R
599440c3ab9c4fc4e7d1745c6b1f6a8d *inst/doc/PTM-Analysis.Rmd
2ffaf89eb4d836949fb5070c884a7661 *inst/doc/PTM-Analysis.html
a631f702a4b68a32a1d5af4b4f8d4c80 *inst/extdata/garrido-2024.csv
56f66c9a8a12b21c1e0c3d2d67e951c0 *inst/extdata/groupComparisonModel.csv
fd832d3b93a52e1f49652ec92bb13e91 *inst/extdata/indraResponse.rds
4233173aa8d89f3c728a7b16429fc73a *inst/extdata/msstats.csv
ee7580600378deb0fb0306a37197b373 *inst/extdata/subnetwork.rds
9ecdf9ec77f8f09e344d199cb7e6c9f0 *inst/script/groupComparisonModel.R
c3a59c86a9fe2d195a490097c888e1fe *man/annotateProteinInfoFromIndra.Rd
e8182e016bd17d5fcc2eebb236488c46 *man/dot-populateHgncIdsInDataFrame.Rd
150d889d38588b6dacb1d074325d0793 *man/dot-populateHgncNamesInDataFrame.Rd
29197e3880d8fb1a37bab9151564ab4f *man/dot-populateKinaseInfoInDataFrame.Rd
256b7e0d29ffbce692eac6fcb2f8864c *man/dot-populatePhophataseInfoInDataFrame.Rd
d6de0dd63e4c3f62445f29f97b993bd3 *man/dot-populateTranscriptionFactorInfoInDataFrame.Rd
92dec988f25ca2b8f9446872a4a01f4c *man/dot-populateUniprotIdsInDataFrame.Rd
714489cf76bb55c02df1b67f67f9a7be *man/dot-validateAnnotateProteinInfoFromIndraInput.Rd
6cd09290ce83d2297c1e151eade07ffa *man/exportNetworkToHTML.Rd
97dad4a48f61bf35aa91ca9983279ba9 *man/generateCytoscapeConfig.Rd
d67a79ab3c111f2b94b7c199c8a29449 *man/generateJavaScriptCode.Rd
24576f3837c2fce50478d052692f2bec *man/getSubnetworkFromIndra.Rd
1d1aa99737cb3f0ca22a174d73f606aa *man/previewNetworkInBrowser.Rd
44a6fd3ea168f37bb878569f9dae7377 *man/visualizeNetworks.Rd
00ee37784a6e02f6896039ef2479b92f *tests/testthat.R
c0a4ed561e966600cc0cda458c05cf44 *tests/testthat/test-annotateProteinInfoFromIndra.R
c0fa84e46e4eb26e44ff18720dec75fe *tests/testthat/test-getSubnetworkFromIndra.R
87cac86bb7f3a6f6f455048e3b9dd887 *tests/testthat/test-utils_annotateProteinInfoFromIndra.R.R
e7fa83e23a6a7ca5525db41cf816e100 *tests/testthat/test-utils_visualizeNetworks.R
3776f6fbaa25cec4dd9154a5f1e89243 *tests/testthat/test-visualizeNetworks.R
8d3415355fee6b839884b51c46143f95 *tests/testthat/test-visualizeNetworksWithHTML.R
263668e462b0178ecd8bb9f205ed397d *vignettes/MSstatsBioNet.Rmd
599440c3ab9c4fc4e7d1745c6b1f6a8d *vignettes/PTM-Analysis.Rmd
