d9ea266fb8cac2e0c162ca48355410c5 *DESCRIPTION
3ce684c90fee6ae937fcb52646363600 *NAMESPACE
ac2c57b33bd34abb14bec34927627b71 *NEWS
c1143ff87b8edb3a6cd8c74951a76989 *R/AllClass.R
aa8427c41bf50144cd7564fe49aba8f8 *R/AllGeneric.R
5616f7ddb461408878dc4be66543cf43 *R/ChIP-seq.R
5616f7ddb461408878dc4be66543cf43 *R/DNase-seq.R
f339e6475f122806d6f24d378b1d6ed0 *R/MOSim-package.R
49aba22b4ef6087fe8385b3603df422f *R/MOSim.R
dd219ffda2f47b77a2e242f2c40da428 *R/RNA-seq.R
c5a57a62ea814443a680fdc382addd50 *R/Simulation.R
4a4c47274828cc2594793139cd144c41 *R/Simulator.R
2d1c66d4cf203f1eb0bd339b958dbd67 *R/SimulatorRegion.R
5cbf2daeaa12ff87fcda702bfb1463a6 *R/data.R
3a631dffb3dd5dde8b1f9086b0b8a31d *R/functions.R
02aa6d52557e7664bc006e06e5ea0814 *R/methyl-seq.R
c456983a4d90ebc72d9e16741182ae86 *R/miRNA-seq.R
9a778caa1f0ad49764326b58204e5799 *R/sc_MOSim.R
be4b2d43841ba3b540a5ea5e96907316 *R/sc_coexpression.R
7870bbdad14e141fe9a24b80dc0f6b2d *R/simulate_WGBS_functions.R
6da29e8b72f0faac3924e3480fc7b17d *R/sparsim_functions.R
7b14032cf9164e749ba0e9e61f67ddfb *R/zzz.R
c2c453222774071d351ce32ce0cfd0db *README.md
9c8145f5973d08a175cbc6e014e776f0 *build/vignette.rds
a8fa973f2bf0fef97ab446a304849090 *data/TF_human.rda
f136f55a8fe440c4fb4dd7c893a63840 *data/associationList.rda
5861aa991f27d10e4d5ae6633323ff11 *data/datalist
40ed4882f410c4b593d86104f8bb933c *data/sampleData.rda
738fc16d8dcbc36093899db9aca48ced *data/scatac.rda
ca59464ca8a1eb8993d9c5b2d67b4f0e *data/scrna.rda
123d5126797b20af714b6b1dc00cbee0 *inst/CITATION
2aea437b308f9e45aa5dac48f5010fc1 *inst/doc/MOSim.R
c616497c3a93bb2c5c8b07427f803c34 *inst/doc/MOSim.Rmd
ce7af9e815485912c4527cdd6286a617 *inst/doc/MOSim.html
422bf11a904513cf698254b2eda4c39c *inst/doc/scMOSim.R
8152383e3b7ae153454836cf6470f122 *inst/doc/scMOSim.Rmd
6a0c95574dedfb86d988028d1f4f930a *inst/doc/scMOSim.html
093f236536934278d7f832c2c93c0095 *man/MOSim-package.Rd
bcf74d43b91b57e75ee2191c805f002f *man/MOSimulation-class.Rd
40d4ccebb5d3b4bceb0c920cf5e617b7 *man/MOSimulator-class.Rd
300aac2842e4ce282c97287487360344 *man/Simulator-class.Rd
80f4817defd1894feb0e758bd118545a *man/TF_human.Rd
88c26be66b40fa4a40fbaa9f712dc84f *man/associationList.Rd
074e513b938594faaf4705f7dac4dbad *man/calculate_mean_per_list_df.Rd
bd1f097544212a8e19226c418fba6699 *man/check_patterns.Rd
361d08f5e0a39db608857e83db83176a *man/discretize.Rd
533cab421d408c2d5398e8a0f7197726 *man/experimentalDesign.Rd
cf1f7ed93bc7b32ea98d2d5be2b8e230 *man/is.declared.Rd
e4a74c063192dfc87998d370688fb0d4 *man/make_association_dataframe.Rd
2cf26044ed8eb89a3d533d92931b5f94 *man/make_cluster_patterns.Rd
425fe435d512143ce5b31c95c8049e2e *man/match_gene_regulator.Rd
b2a359212b0fc547eb06a2195bce09bb *man/match_gene_regulator_cluster.Rd
4509ed555f7189826571c858c7e690ea *man/mosim.Rd
470565069879d799996f2acbd62b62b3 *man/omicData.Rd
b5a42ebc6238221a7af09b4ea4773ca2 *man/omicResults.Rd
dd4ff0cf7a28b0d0ba51b93b40199f50 *man/omicSettings.Rd
342b6e3297a14c591f4e701ada6594ee *man/omicSim.Rd
4f1dea1d1d6384cac9c02eb27e5d5dfc *man/plotProfile.Rd
af5ae8c8dbe341a5e1b259f0bd52ef9c *man/random_unif_interval.Rd
4a42674f87273778894cdcfd552148ed *man/sampleData.Rd
897d8fb95adc62b405167aa6e00472ee *man/sc_mosim.Rd
c0d70c5413885ee432422e30d9228c91 *man/sc_omicData.Rd
59d9480aab40a2c2d4d33d52a11bf91a *man/sc_omicResults.Rd
189cea29b232661a7eb6b84d3a45c956 *man/sc_omicSettings.Rd
bc3664a7e700a641eae2a335c5cb6371 *man/sc_param_estimation.Rd
2aa95244485a89784e9f886001bfb96b *man/scatac.Rd
bb8a9763a67c32f580bf35f8e88cdff8 *man/scrna.Rd
4cab9589f044c1d521ea7715465ef509 *man/shuffle_group_matrix.Rd
038e1225f7610391ec1d5d213124176f *man/simulate_coexpression.Rd
aa2d1e9425e2df9f79683e4470729225 *man/simulate_hyper.Rd
e769c9219d96c64df8c7b74fea382736 *man/sparsim_create_simulation_parameter.Rd
45e451bc93ee097f2e8a1acc10e1fdaf *man/sparsim_estimate_intensity.Rd
c2f7354fec307c11eb812391888139bb *man/sparsim_estimate_library_size.Rd
5c11639401623125f83bcd3eea01a3cb *man/sparsim_estimate_parameter_from_data.Rd
1295a6dbf70d91431e75176a757a0396 *man/sparsim_estimate_variability.Rd
aea0ede0bb0172bcc2a0a572befd8b3e *man/sparsim_simulation.Rd
752c815f1bd6ee6f3989b1cc56c59ebb *src/Random_number.cpp
5e2d345a65207d1a2183e77c93a9a107 *tests/testthat.R
415f6cc3b99c7193c23bbf962f8a369d *tests/testthat/test_Methylseq.R
8211ff58c5632a81f8c8dbe70b3411c2 *tests/testthat/test_RNAseq.R
d2109fa435dc1baff0bf93036c5a72e2 *tests/testthat/test_helpers.R
f13cfa37260dd4c1ae9418f592a048eb *tests/testthat/test_scMOSim.R
5c19defb7f7071c85ee744160f0e3a19 *tests/testthat/test_settings.R
c616497c3a93bb2c5c8b07427f803c34 *vignettes/MOSim.Rmd
8152383e3b7ae153454836cf6470f122 *vignettes/scMOSim.Rmd
