10e821d8beb552d6a30a32a7a14fa4a0 *DESCRIPTION
e167c035c0c8ddcb031873835317c9bb *InTAD.Rproj
74cef630f596b9e31028e9e55b9f0207 *NAMESPACE
209c5dd713382bd8c3e67732721c2d81 *R/InTADSig-methods.R
0839c993c68ffeb9723badbee2f1c1a8 *R/InTADSig.R
e378a325a8e5ae79decfb2dc30d6cb6b *R/combineSignalsInTAD.R
7146bfc752c0bdd7b00cd307a61d07a7 *R/combineSignalsWithLoops.R
8535ef80841298546452d001eec51c78 *R/example_data_info.R
88822e374f9253411dfd24d107cf1864 *R/filterGeneExpr.R
2e845a83fd3b429e12fdcf8da7d81d75 *R/findCorrelation.R
df8f9db58831552c3a81abcf9880e2c1 *R/plotCorrelation.R
645127c2caf1ea5bf20dd0ee14a7571f *README.md
05d468db0fed2054149e125a175b9ad7 *build/vignette.rds
029111e902029dfcc8cc0cfa15ffeaad *data/enhSelCoords.rda
cba6b5bbaf132f1f277373588caeaa67 *data/loops_imr90.rda
7a4b3d3ff105396e282e29ad8f10e475 *data/mbAnnData.rda
84b523bd655c138a4243e80dab8727d7 *data/mbSamplesRPKM.rda
b5c969dabc056175fe2e243cddd050db *data/mbSelEnhSignals.rda
28b5ce2a9cc23fc0d14bbcdebb3015df *data/tad_hg19.rda
4393f922fa53f4ca6ad0af45e599ef4a *data/txsSel.rda
26580bbfa5339373be32618ebd749291 *inst/CITATION
81683f752f4230e7d4318e3f6aac1c27 *inst/NEWS
8e4cbf437bddadb3f3247fe99eedc798 *inst/doc/InTAD.R
4b3c06d67c5299428de339d296c94368 *inst/doc/InTAD.Rmd
854e5a68bac9a90544d588d241a82450 *inst/doc/InTAD.html
30855880a63af3b4350455cfabad8a86 *man/InTADSig.Rd
53b5c5d69fd8632805d71e3890edd77e *man/combineInTAD.Rd
2c1e016e20fa6c6ffec5be02c986c636 *man/combineWithLoops.Rd
c1f25e7cc149fe3e1a17fca14df76424 *man/enhSel.Rd
2a1d6ee685ac9823b508924ac9eece5f *man/enhSelGR.Rd
8e45ca9b70498b5d732da619e7d2e3f5 *man/exprs.Rd
b9fcd0ae70e483417459d763a2e1136c *man/filterGeneExpr.Rd
f60b982b7c22dc227ffb0ccafe2e19c7 *man/findCorFromLoops.Rd
b48f1b6de3bc30c1c5c5d9c47f754b11 *man/findCorrelation.Rd
62019b2a0f0267d331511cc233c33755 *man/fnSE.Rd
a114ca9f661c849c23c8ab95a9288bd7 *man/geneCoords.Rd
7b5795f0fc617e08a7abdb5bdf89b57c *man/get.enr.bg.normfit.Rd
3012852ee6aef34358a56197b55d65ff *man/loadSigInTAD.Rd
7f7365e001bc237de3cd185d9a6cc1f2 *man/loopsDfSel.Rd
227501314d1e175e4f083e04417946da *man/mbAnnData.Rd
e862552df4ad608c89e9179f37e7c8bd *man/newSigInTAD.Rd
a607e0db09415a086e18f32fe08ee27c *man/plotCorAcrossRef.Rd
a0d81982c3fae9bcccee1249a6006178 *man/plotCorrelation.Rd
27a19150b4cea941cedd63f222b85cf3 *man/rpkmCountsSel.Rd
c219cba82fc5ec96daa4b947f3b87b0d *man/sigCoords.Rd
b7c36892c19b9c92db103c80595ef661 *man/signals.Rd
fd248e6fe9b53cb5fd5db8100e5b1307 *man/tadGR.Rd
25d36ab1056c712b287d7fc2c1647b86 *man/txsSel.Rd
769dcd5c0655eab6ce4beac04a03f660 *tests/testthat.R
6df31f125e46a8278e87082230eb629e *tests/testthat/test-cor.R
f783387adc6aaa5187ffa9436f631d4e *tests/testthat/test-expr-filter.R
981f615b1d0146f6d4613630a7c91d9f *tests/testthat/test-objects.R
4b3c06d67c5299428de339d296c94368 *vignettes/InTAD.Rmd
9a66ac2ab3fba46746a600fc36d6ac79 *vignettes/figures/loops_image.png
