3b2e9df6fc420e5fe69ff92bec2761b4 *DESCRIPTION
946e83f6ececdaee88eba26853ba069c *LICENSE
22b32899c1f014f5ba7da0a1da55630b *NAMESPACE
0d50e134dc77f0a71bf47550d79d7dfd *R/4C.R
b233b5de5795e411eb6e663b1ac9aa3f *R/AllGenerics.R
285c3f18dce489fc5a1a8a418e6d17af *R/Ps.R
1fb23bde08a6830340fcd49694afafb5 *R/aggregate.R
c259fb47251816925984f2b1c8854800 *R/arithmetics.R
5fcf42656a916bf543d889d06a0806ee *R/boost.R
42ef2e283c06b01e2e830a0c2d7f2c27 *R/checks.R
4711e9dbd426b2be9e6752842b17716d *R/cistrans.R
cafa2706b4b280d421f0a95a2ad7b4ed *R/coarsen.R
c0f1e6046f59bc370d7d004640d09c65 *R/compartments.R
d1bfd650272ef2c9559b54125d6a5d08 *R/contacts.R
faf33b2fddf66fbbf0881ac7e8c4c0a7 *R/diamond.R
c885a670f6efcc646f4f53560c8b7297 *R/globals.R
141d9740d6534884912f3ecc344d4621 *R/loops.R
5c1a47ddb1d15c90dfab7b2c49ff098b *R/normalize.R
2a70f7197e96dd0582f1fb9b9ec8bce4 *R/plotting.R
43015365e33def94e7eee03da6339d9e *R/reexports.R
7982d0a999a0c10b1298f970989844c5 *R/scalogram.R
8047d9857cf829b9749cbbba916b7a0a *R/subsample.R
e4fb5d7c52d36090e57640e084f7d1b0 *R/tracks.R
20038d321fefb801f51b06258882c9a1 *R/utils.R
abcd29f394208a4c27347b0b25ea9c52 *README.md
760593e6d8b4f8fbc6d11de1c230caa0 *build/vignette.rds
98e2b5e88eface38e70a77ac60783eb9 *inst/CITATION
4098e54f15f0ebd42eec554847849b93 *inst/doc/HiContacts.R
5a8a9bf38894c9099d211c3958aec371 *inst/doc/HiContacts.Rmd
3f2eec6aae61cdb6497371f5cd7e8eb0 *inst/doc/HiContacts.html
99c2df2a91358fd2f8b7385a5138d75d *inst/extdata/S288C-borders.bed
41b91455e71bc0b4946d54cd1c90dd2a *inst/extdata/S288C-loops.bedpe
830ad0312f05b94ff433b831b6c926c2 *man/Contacts.Rd
b127ce103501224ba15762724023a975 *man/HiContacts-plots.Rd
3e28b8a484ab8eb3f83b0fe5c6ad7c60 *man/Ps.Rd
b18a1bb10954e01866773099ddb54804 *man/arithmetics.Rd
07e10e8485119c65a9b87e392dcbb405 *man/checks.Rd
a6ec9ec90a89c18f8dca8e3603e83681 *man/cisTransRatio.Rd
cdfd7cb1ad806a020b04fa864ac20f10 *man/getCompartments.Rd
6eca2779fc74519459b33744a0e4c5a3 *man/getDiamondInsulation.Rd
287142b868c96de7823da9c6f40fef74 *man/getLoops.Rd
436e5a051e88532dc676bb0790723274 *man/palettes.Rd
47edafb26a2ef8e4cca15c4869b49e72 *man/plot4C.Rd
438f814101e43598e3d9fb170c44d25d *man/plotMatrix.Rd
33154902f4c7cc96532dab689d9d1645 *man/plotPs.Rd
41f036d176792b70a6cc0eb60832dedd *man/plotSaddle.Rd
8d7490341665157fd0b97e01093f86ab *man/plotScalogram.Rd
9372135d3f119a55c33f2b090c30e8de *man/reexports.Rd
eac24c9085316eddb4521809ccdb95cc *man/scalogram.Rd
c1c5d37b379b4b20e710fc2ea78d4a2d *man/tracks.Rd
1a8be15826e9edcfbe1c49596fff92ff *man/virtual4C.Rd
3d161dee8a0b2bb1f9e903491379bad0 *tests/testthat.R
4867fdf5eb3ab3ac47fc47dc6783b72b *tests/testthat/test-arithmetics.R
d47ab8eca191247da4d222260e5da898 *tests/testthat/test-comps-insulation-scalogram.R
08fcc5531de5f9ea21e47792d15556c5 *tests/testthat/test-data.R
127d10d31cc15b313dcf65783755f51b *tests/testthat/test-plotMatrix.R
08f88bbdd7e0e955dee7412f2f275a4e *tests/testthat/test-v4C-cistrans-Ps-utils.R
5a8a9bf38894c9099d211c3958aec371 *vignettes/HiContacts.Rmd
