78e8b3b84d5a421201b5996848c05897 *DESCRIPTION
3e411ba435faec3a2da6379b01e0a8d6 *NAMESPACE
90508a5709a3a69b1d55c408fbe80ae3 *R/Clomial-internal.R
972f048d2538c3575c4d1c5bbfb698fe *R/Clomial.R
cbcf9c4103ddc98d13c4601399046cf9 *R/Clomial.generate.data.R
dee8a005056e5127b2409e743a253f21 *R/Clomial.iterate.R
945d09325242edd8c02c8543112a0749 *R/Clomial.likelihood.R
b82ce3e32e4851f5aeb34969073555b8 *R/P2W.R
384e0da68846555c2645d1f8aaa3fe2b *R/Phi.R
e0fc355c1418bf71b3c1e26236d03dd8 *R/W2P.R
dfa3816c52980ff41adeb0c754f6b175 *R/best.match.R
6bb3c9c6038dcba622a3123ef9d3d000 *R/check.Wj.R
eb1cbd8297d14ef0b07324f38bfe96b9 *R/choose.best.R
20302f70d10582ce87c94e1d057894d2 *R/compute.P.reparam.R
b521904ced331f358b3f5215ebf3e719 *R/compute.bic.R
8b1d354364770aa4ab36e37ec93f09bc *R/compute.errors.R
9945fdf9de66ea4b882a0f9fa2c657fb *R/compute.mu.R
312de472597d5d4fed38f3493db8a5ef *R/compute.q.R
e95da3af623ca9325283703a7d639c6e *R/compute.unity.states.R
5aae83fd040150e085b645da4b6dbec1 *R/dPdW.R
8f568970a3b41bdb2b969983ab28f289 *R/dPhidPcp.R
a33af392fe7571451e9e4d47c2ebfd85 *R/dPhidW.R
980d9626c4ef6580481f62250b313a2a *R/decimal2binary.R
3928023c3d19d4a52743950f81eacbb2 *R/normalizeQ.R
9907dbacdae4ade02a6f5b45319570fb *R/protect.P.R
e5b18935991b384834d9530f60dd8c26 *R/reorder.clones.R
4495ac6418f8ab839462dcd1991ecac7 *R/row.z.likelihood.R
d8a687dfbeeadb209ef7955574d70eaa *R/rsub.R
6e86cc73eb89a9daf433ff2026c32d93 *build/vignette.rds
9ba4e5b6ca399310c6414d616eceecd0 *data/Clomial1000.rda
2f640acbef54e86d3c97c943d48dd6bf *data/breastCancer.rda
8d90eb2118f5b5979f6a53f6c1a8f259 *data/datalist
1a4be43c044cc0a7fa5263fae5845298 *inst/CITATION
aa149d89136d5d7296cca42f220007f0 *inst/NEWS
41d30f772f9ac291013c58da6cd54e0e *inst/doc/Clonal_decomposition_by_Clomial.R
8ed48aed4ee125286399b003e1b1ec7f *inst/doc/Clonal_decomposition_by_Clomial.Rnw
737672336e164e4d11a71a1efcfe042f *inst/doc/Clonal_decomposition_by_Clomial.pdf
4bf5d9c0ccf42f69fb3631f4341d8019 *man/Clomial-package.Rd
e17dbab192a7798b472c2bed9ca32ed3 *man/Clomial.Rd
9447cf471fa90aabbaca7dcb94b2a482 *man/Clomial.generate.data.Rd
45e3f0b2fc81a5ecdf4293800dba14b2 *man/Clomial.iterate.Rd
ca2d8f0587c5248a5edebe4070ea2f02 *man/Clomial.likelihood.Rd
89553b038bf144a2fde92f7b449db41f *man/Clomial1000.Rd
3be3a2bcc8a829d09214c7c28174d6d5 *man/breastCancer.Rd
4391f1f246751fcf701ba7e3bd9e92c5 *man/choose.best.Rd
d1579888ed7356c03b13c9680407addb *man/compute.bic.Rd
1ec86e8f8a02587c280ff70441eb3766 *man/compute.errors.Rd
8ed48aed4ee125286399b003e1b1ec7f *vignettes/Clonal_decomposition_by_Clomial.Rnw
