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paircompviz

Multiple comparison test visualization


Bioconductor version: Release (3.19)

This package provides visualization of the results from the multiple (i.e. pairwise) comparison tests such as pairwise.t.test, pairwise.prop.test or pairwise.wilcox.test. The groups being compared are visualized as nodes in Hasse diagram. Such approach enables very clear and vivid depiction of which group is significantly greater than which others, especially if comparing a large number of groups.

Author: Michal Burda

Maintainer: Michal Burda <michal.burda at osu.cz>

Citation (from within R, enter citation("paircompviz")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("paircompviz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("paircompviz")
Using paircompviz PDF R Script
Reference Manual PDF

Details

biocViews GraphAndNetwork, Software
Version 1.42.0
In Bioconductor since BioC 2.13 (R-3.0) (10.5 years)
License GPL (>=3.0)
Depends R (>= 2.10), Rgraphviz
Imports Rgraphviz
System Requirements
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Suggests multcomp, reshape, rpart, plyr, xtable
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package paircompviz_1.42.0.tar.gz
Windows Binary paircompviz_1.42.0.zip
macOS Binary (x86_64) paircompviz_1.42.0.tgz
macOS Binary (arm64) paircompviz_1.42.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/paircompviz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/paircompviz
Bioc Package Browser https://code.bioconductor.org/browse/paircompviz/
Package Short Url https://bioconductor.org/packages/paircompviz/
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