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SMAP

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling


Bioconductor version: Release (3.19)

Functions and classes for DNA copy number profiling of array-CGH data

Author: Robin Andersson <robin.andersson at lcb.uu.se>

Maintainer: Robin Andersson <robin.andersson at lcb.uu.se>

Citation (from within R, enter citation("SMAP")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SMAP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews CopyNumberVariation, Microarray, Software, TwoChannel
Version 1.68.0
In Bioconductor since BioC 2.1 (R-2.6) (16.5 years)
License GPL-2
Depends R (>= 2.10), methods
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary SMAP_1.68.0.zip (64-bit only)
macOS Binary (x86_64) SMAP_1.68.0.tgz
macOS Binary (arm64) SMAP_1.68.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SMAP
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SMAP
Package Short Url https://bioconductor.org/packages/SMAP/
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