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Addon to CellNOptR: Fuzzy Logic

Bioconductor version: Release (3.19)

This package is an extension to CellNOptR. It contains additional functionality needed to simulate and train a prior knowledge network to experimental data using constrained fuzzy logic (cFL, rather than Boolean logic as is the case in CellNOptR). Additionally, this package will contain functions to use for the compilation of multiple optimization results (either Boolean or cFL).

Author: M. Morris, T. Cokelaer

Maintainer: T. Cokelaer <cokelaer at>

Citation (from within R, enter citation("CNORfuzzy")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Main vignette:Playing with networks using CNORfuzzyl PDF R Script
Reference Manual PDF


biocViews Network, Software
Version 1.46.0
In Bioconductor since BioC 2.11 (R-2.15) (11.5 years)
License GPL-2
Depends R (>= 2.15.0), CellNOptR(>= 1.4.0), nloptr (>= 0.8.5)
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Suggests xtable, Rgraphviz, RUnit, BiocGenerics
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Follow Installation instructions to use this package in your R session.

Source Package CNORfuzzy_1.46.0.tar.gz
Windows Binary (64-bit only)
macOS Binary (x86_64) CNORfuzzy_1.46.0.tgz
macOS Binary (arm64) CNORfuzzy_1.46.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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