P_graph                 Build Probability-Based Network
P_null                  Build Null Distribution of Probability-Based
                        Distance
accessibility_network   Build Network from Accessibility Peaks.
adjust_graph            Re-calculate PageRank
aracne_network          Re-format ARACNe Network.
bubble_plot             Make Bubbleplot
clean_graph             Clean Graph
conformation_network    Build Network from Conformation Peaks.
diff_graph              Calculate Temporal PageRank from Two Graphs
get_color_gradient      Generate Color Gradient
multiplex_page_rank     Calculate Multiplex PageRank
time_expmat             Generate Timewise Average Gene Expression
