Package: censcyt
Version: 1.18.0
Title: Differential abundance analysis with a right censored covariate
        in high-dimensional cytometry
Description: Methods for differential abundance analysis in high-dimensional cytometry data when a covariate is subject to right censoring (e.g. survival time) based on multiple imputation and generalized linear mixed models.
Authors@R: person("Reto", "Gerber", email = "gerberreto@pm.me", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-5414-8906"))
URL: https://github.com/retogerber/censcyt
BugReports: https://github.com/retogerber/censcyt/issues
License: MIT + file LICENSE
biocViews: ImmunoOncology, FlowCytometry, Proteomics, SingleCell,
        CellBasedAssays, CellBiology, Clustering, FeatureExtraction,
        Software, Survival
Depends: R (>= 4.0), diffcyt
Imports: BiocParallel, broom.mixed, dirmult, dplyr, edgeR,
        fitdistrplus, lme4, magrittr, MASS, methods, mice, multcomp,
        purrr, rlang, S4Vectors, stats, stringr, SummarizedExperiment,
        survival, tibble, tidyr, utils
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown, testthat, ggplot2
RoxygenNote: 7.1.2
git_url: https://git.bioconductor.org/packages/censcyt
git_branch: RELEASE_3_22
git_last_commit: c86eeed
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.22
Date/Publication: 2025-10-29
NeedsCompilation: no
Packaged: 2025-10-30 02:16:07 UTC; biocbuild
Author: Reto Gerber [aut, cre] (ORCID: <https://orcid.org/0000-0001-5414-8906>)
Maintainer: Reto Gerber <gerberreto@pm.me>
Built: R 4.5.1; ; 2025-10-30 09:18:49 UTC; unix
