AnnData interoperability in R

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Documentation for package ‘anndataR’ version 1.0.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

AbstractAnnData	Abstract AnnData class
AbstractAnnData-s3methods	S3 Methods for AbstractAnnData Objects
AnnData	Create an in-memory AnnData object.
AnnData-usage	AnnData structure and usage
AnnDataView	A View of an AnnData Object
as_AnnData	Convert to an 'AnnData' object
as_AnnData.Seurat	Convert to an 'AnnData' object
as_AnnData.SingleCellExperiment	Convert to an 'AnnData' object
as_Seurat	Convert an 'AnnData' to a 'Seurat'
as_SingleCellExperiment	Convert an 'AnnData' to a 'SingleCellExperiment'
dim.AbstractAnnData	S3 Methods for AbstractAnnData Objects
dimnames.AbstractAnnData	S3 Methods for AbstractAnnData Objects
dimnames<-.AbstractAnnData	S3 Methods for AbstractAnnData Objects
generate_dataset	Generate a mock dataset
get_generator_types	Generate a mock dataset
HDF5AnnData	HDF5AnnData
InMemoryAnnData	InMemoryAnnData
ncol.AbstractAnnData	S3 Methods for AbstractAnnData Objects
nrow.AbstractAnnData	S3 Methods for AbstractAnnData Objects
py_to_r.anndata._core.anndata.AnnData	Reticulate Helper Functions for AnnData Conversion
py_to_r.collections.abc.Mapping	Reticulate Helper Functions for AnnData Conversion
read_h5ad	Read H5AD
reticulate-helpers	Reticulate Helper Functions for AnnData Conversion
ReticulateAnnData	ReticulateAnnData
r_to_py.AbstractAnnData	Reticulate Helper Functions for AnnData Conversion
write_h5ad	Write H5AD
[.AbstractAnnData	S3 Methods for AbstractAnnData Objects